BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6261at6073Duplicated699.5384.0amic_s0011.g76.t2SEC14 cytosolic factor-likeJBrowse
6261at6073Duplicated672.8363.0amic_s0011.g76.t1SEC14 cytosolic factor-likeJBrowse
6314at6073Complete896.1591.0amic_s0075.g38.t1SET and MYND domain-containing protein 4JBrowse
6330at6073Complete977.1481.0amic_s0002.g84.t1ER degradation-enhancing alpha-mannosidase-like protein 2JBrowse
6358at6073Complete716.0358.0amic_s0069.g29.t1dual specificity mitogen-activated protein kinase kinase 1JBrowse
6371at6073Complete394.1165.0amic_s0161.g5.t1NADH-ubiquinone oxidoreductase subunit 8JBrowse
6375at6073Complete754.5414.0amic_s0250.g7.t1putative cytochrome P450 120JBrowse
6410at6073Complete1377.4741.0amic_s0168.g45.t1ubiquitin-protein ligase E3AJBrowse
6483at6073Complete2162.8965.0amic_s0235.g23.t2UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
6500at6073Duplicated623.0391.0amic_s0116.g69.t1uncharacterized protein LOC110045530 isoform X1JBrowse
6500at6073Duplicated621.6388.0amic_s0116.g69.t2uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Complete1415.3814.0amic_s0176.g24.t1anion exchange protein 2-likeJBrowse
6528at6073Complete447.5230.0amic_s0180.g34.t1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6600at6073Complete1271.9783.0amic_s0005.g90.t1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Duplicated517.2257.0amic_s1513.g2.t1probable tRNA(His) guanylyltransferaseJBrowse
6672at6073Duplicated506.2257.0amic_s1513.g2.t2probable tRNA(His) guanylyltransferaseJBrowse
6674at6073Fragmented868.1404.0amic_s0008.g109.t1AconitaseJBrowse
6686at6073Complete289.8256.0amic_s0019.g58.t1transmembrane protein 248JBrowse
6716at6073Complete176.199.0amic_s0068.g33.t1Small integral membrane protein 14JBrowse
6727at6073Duplicated405.9220.0amic_s0009.g28.t1Radial spoke head 1JBrowse
Go to page: of 171 pages
TOP