BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4064at6073Complete863.0494.0XP_074635682.1T-box transcription factor TBX3-likeJBrowse
4079at6073Duplicated326.1228.0XP_074615168.1sorting nexin-10B-likeJBrowse
4079at6073Duplicated323.8221.0XP_074615169.1sorting nexin-10B-likeJBrowse
4090at6073Duplicated316.4225.0XP_074606055.1noggin-likeJBrowse
4090at6073Duplicated316.4225.0XP_074606056.1noggin-likeJBrowse
4090at6073Duplicated316.4225.0XP_074606057.1noggin-likeJBrowse
4090at6073Duplicated316.4225.0XP_074606058.1noggin-likeJBrowse
4090at6073Duplicated316.4225.0XP_074606059.1noggin-likeJBrowse
4090at6073Duplicated316.4225.0XP_074606060.1noggin-likeJBrowse
4090at6073Duplicated316.4225.0XP_074606062.1noggin-likeJBrowse
4117at6073Duplicated459.8214.0XP_074628384.1ras-related protein Rab-5B-likeJBrowse
4117at6073Duplicated459.8214.0XP_074628386.1ras-related protein Rab-5B-likeJBrowse
4117at6073Duplicated459.8214.0XP_074628387.1ras-related protein Rab-5B-likeJBrowse
4122at6073Complete372.6179.0XP_074626027.1Trafficking protein particle complex subunit 3JBrowse
4138at6073Complete917.7428.0XP_074610830.1isocitrate dehydrogenase JBrowse
4148at6073Complete755.5485.0XP_074639698.1sphingosine kinase 2-likeJBrowse
4192at6073Duplicated932.9593.0XP_074617831.1Prolyl 3-hydroxylase 2JBrowse
4192at6073Duplicated930.8593.0XP_074617832.1Prolyl 3-hydroxylase 2JBrowse
4196at6073Complete1205.0693.0XP_074614386.1NHL repeat-containing protein 2JBrowse
4204at6073Complete660.1379.0XP_074635230.1ethanolaminephosphotransferase 1JBrowse
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