BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6511at6073Duplicated1081.4813.0FUN_017765-T1anion exchange protein 2-likeJBrowse
6511at6073Duplicated1034.4801.0FUN_017773-T1anion exchange protein 2-likeJBrowse
6528at6073Complete452.2236.0FUN_024043-T1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6530at6073Complete322.9212.0FUN_012414-T1sex-determining region Y proteinJBrowse
6591at6073Complete571.0309.0FUN_011287-T1citramalyl-CoA lyase, mitochondrial-likeJBrowse
6600at6073Complete1273.6783.0FUN_037986-T1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Complete517.8257.0FUN_038514-T2probable tRNA(His) guanylyltransferaseJBrowse
6674at6073Complete1687.0775.0FUN_038688-T1AconitaseJBrowse
6686at6073Complete286.1256.0FUN_014893-T1transmembrane protein 248JBrowse
6716at6073Fragmented137.772.0FUN_010746-T1Small integral membrane protein 14JBrowse
6727at6073Complete404.6220.0FUN_022315-T1Radial spoke head 1JBrowse
6767at6073Duplicated146.484.0FUN_025781-T210 kda heat shock proteinJBrowse
6767at6073Duplicated146.384.0FUN_025781-T110 kda heat shock proteinJBrowse
6833at6073Complete286.0181.0FUN_009856-T1AP-5 complex subunit sigma-1JBrowse
6836at6073Complete894.4506.0FUN_006751-T1ATP-dependent RNA helicase DDX41JBrowse
6883at6073Complete656.0432.0FUN_040300-T1Neurotransmitter-gated ion-channel ligand-binding domainJBrowse
6910at6073Complete376.4249.0FUN_032221-T1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Complete728.3418.0FUN_013377-T1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6963at6073Complete339.0251.0FUN_038917-T1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6965at6073Complete451.2297.0FUN_045628-T1Histidine protein methyltransferase 1JBrowse
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