BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3559at6073Duplicated817.9411.0BRAKERHOCP00005020468.1putative ATP-dependent RNA helicase ddx6JBrowse
3559at6073Duplicated817.9411.0g8440.t1.1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Fragmented143.3231.0BRAKERHOCP00005010590.1spermatogenesis-associated protein 48JBrowse
3576at6073Fragmented458.0259.0BRAKERHOCP00005015898.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Duplicated951.7438.0BRAKERHOCP00005019653.1AP-2 complex subunit muJBrowse
3582at6073Duplicated951.7438.0g9781.t1.1AP-2 complex subunit muJBrowse
3598at6073Duplicated570.2263.0BRAKERHOCP00005001071.1E3 ubiquitin-protein ligase SIAH1JBrowse
3598at6073Duplicated570.2263.0g7146.t1.1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Fragmented183.3153.0BRAKERHOCP00005013245.139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Duplicated1267.4859.0BRAKERHOCP00005020769.1Peripheral plasma membrane CASKJBrowse
3663at6073Duplicated1267.4859.0g8160.t1.1Peripheral plasma membrane CASKJBrowse
3691at6073Duplicated519.7358.0BRAKERHOCP00005010571.1Soluble calcium-activated nucleotidase 1JBrowse
3691at6073Duplicated519.7358.0g16005.t1.1Soluble calcium-activated nucleotidase 1JBrowse
3707at6073Duplicated354.0266.0BRAKERHOCP00005013354.1protein rogdi homologJBrowse
3707at6073Duplicated354.0266.0g19354.t2.1protein rogdi homologJBrowse
3738at6073Duplicated530.5393.0BRAKERHOCP00005013665.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3738at6073Duplicated530.5393.0g19885.t1.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3752at6073Duplicated186.584.0BRAKERHOCP00005009185.1ubiquitin-fold modifier 1JBrowse
3752at6073Duplicated186.584.0g2310.t1.1ubiquitin-fold modifier 1JBrowse
3768at6073Duplicated1129.2619.0BRAKERHOCP00005016456.1glycogen JBrowse
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