BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6883at6073Complete666.9432.0pspe_0.1.m1.16622.m1Neurotransmitter-gated ion-channel ligand-binding domainJBrowse
6910at6073Fragmented127.391.0pspe_0.1.m1.20248.m1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Complete691.8417.0pspe_0.1.m1.39797.m1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6963at6073Complete318.3251.0pspe_0.1.m1.41095.m1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6970at6073Complete933.8467.0pspe_0.1.m1.29520.m1ribosomal protein S6 kinase beta-1JBrowse
6971at6073Fragmented408.2460.0pspe_0.1.m1.15030.m1uncharacterized protein LOC116290996JBrowse
6982at6073Complete379.6240.0pspe_0.1.m1.39212.m1alkaline ceramidase 3JBrowse
6986at6073Complete1116.9539.0pspe_0.1.m1.55065.m1EH domain-containing protein 3JBrowse
7017at6073Complete533.9404.0pspe_0.1.m1.19698.m1zinc finger protein 503JBrowse
7018at6073Complete551.1392.0pspe_0.1.m1.45021.m1synaptosomal-associated protein 47JBrowse
7023at6073Complete386.8335.0pspe_0.1.m1.8268.m1serine proteaseJBrowse
7030at6073Complete446.4260.0pspe_0.1.m1.31540.m150S ribosomal protein L4-likeJBrowse
7035at6073Complete990.3663.0pspe_0.1.m1.10221.m1tRNA wybutosine-synthesizing protein 4JBrowse
7131at6073Complete301.5178.0pspe_0.1.m1.46495.m1ADP-ribosylation factor 16JBrowse
7189at6073Complete842.3528.0pspe_0.1.m1.64876.m1double-stranded RNA-specific editase 1JBrowse
7225at6073Complete676.6395.0pspe_0.1.m1.20659.m1uncharacterized protein LOC116299609JBrowse
7235at6073Complete1320.5786.0pspe_0.1.m1.38681.m1phospholipase D1-likeJBrowse
7248at6073Complete1998.01061.0pspe_0.1.m1.21050.m1WD repeat-containing protein 49JBrowse
7269at6073Complete1272.2744.0pspe_0.1.m1.65345.m1chondroitin sulfate synthase 2JBrowse
7275at6073Complete586.8320.0pspe_0.1.m1.35582.m1zinc transporter ZIP11-likeJBrowse
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