BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6098at6073Complete231.4205.0CAB3998126.1homeobox protein Nkx-6.1JBrowse
6124at6073Complete328.3172.0CAB4027590.1secretory immunoglobulin A-binding protein EsiB-likeJBrowse
6132at6073Fragmented202.6124.0CAB4012041.1tRNA-specific adenosine deaminase 2JBrowse
6185at6073Fragmented767.9421.0CAB4020051.1replication protein A 70 kDa DNA-binding subunitJBrowse
6198at6073Duplicated1318.6835.0CAB3994059.1uncharacterized protein LOC114955792 isoform X1JBrowse
6198at6073Duplicated1316.8834.0CAB3994060.1uncharacterized protein LOC114955792 isoform X1JBrowse
6199at6073Complete894.3426.0CAB4014043.1citrate synthase, mitochondrial-likeJBrowse
6261at6073Complete651.4378.0CAB3977346.1SEC14 cytosolic factor-likeJBrowse
6330at6073Fragmented599.8308.0CAB3988281.1ER degradation-enhancing alpha-mannosidase-like protein 2JBrowse
6358at6073Complete681.8358.0CAB4015395.1dual specificity mitogen-activated protein kinase kinase 1JBrowse
6371at6073Complete408.7188.0CAB3988619.1NADH-ubiquinone oxidoreductase subunit 8JBrowse
6375at6073Complete699.1414.0CAB3981651.1putative cytochrome P450 120JBrowse
6403at6073Complete263.0150.0CAB4024179.1bis(5'-adenosyl)-triphosphataseJBrowse
6410at6073Fragmented589.7287.0CAB4005468.1ubiquitin-protein ligase E3AJBrowse
6431at6073Duplicated418.1267.0CAB3978933.1probable transcriptional regulatory protein Kole_1935JBrowse
6431at6073Duplicated413.5261.0CAB3978934.1probable transcriptional regulatory protein Kole_1935JBrowse
6483at6073Complete2088.0963.0CAB3985848.1UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
6500at6073Fragmented449.9319.0CAB4024514.1uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Complete839.2795.0CAB3982685.1anion exchange protein 2-likeJBrowse
6528at6073Complete399.8233.0CAB3994763.1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
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