BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6261at6073Complete637.0382.0NY_Scal100_v1.1828.1SEC14 cytosolic factor-likeJBrowse
6314at6073Complete837.7587.0NY_Scal100_v1.4683.1SET and MYND domain-containing protein 4JBrowse
6330at6073Complete925.0478.0NY_Scal100_v1.32175.1ER degradation-enhancing alpha-mannosidase-like protein 2JBrowse
6358at6073Complete621.0356.0NY_Scal100_v1.6386.1dual specificity mitogen-activated protein kinase kinase 1JBrowse
6375at6073Complete683.4409.0NY_Scal100_v1.53577.1putative cytochrome P450 120JBrowse
6403at6073Complete245.0147.0NY_Scal100_v1.21468.1bis(5'-adenosyl)-triphosphataseJBrowse
6410at6073Fragmented804.9375.0NY_Scal100_v1.15953.1ubiquitin-protein ligase E3AJBrowse
6431at6073Duplicated398.5264.0NY_Scal100_v1.24608.1probable transcriptional regulatory protein Kole_1935JBrowse
6431at6073Duplicated362.1264.0NY_Scal100_v1.26656.1probable transcriptional regulatory protein Kole_1935JBrowse
6500at6073Fragmented429.2301.0NY_Scal100_v1.18884.1uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Complete923.3712.0NY_Scal100_v1.47802.1anion exchange protein 2-likeJBrowse
6528at6073Complete428.4234.0NY_Scal100_v1.51707.1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6591at6073Complete494.0283.0NY_Scal100_v1.30938.1citramalyl-CoA lyase, mitochondrial-likeJBrowse
6600at6073Fragmented504.8327.0NY_Scal100_v1.14334.1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Complete449.2227.0NY_Scal100_v1.1626.1probable tRNA(His) guanylyltransferaseJBrowse
6686at6073Fragmented92.2152.0NY_Scal100_v1.8792.1transmembrane protein 248JBrowse
6716at6073Complete161.099.0NY_Scal100_v1.3339.1Small integral membrane protein 14JBrowse
6727at6073Complete375.6219.0NY_Scal100_v1.12361.1Radial spoke head 1JBrowse
6767at6073Complete170.998.0NY_Scal100_v1.12534.110 kda heat shock proteinJBrowse
6833at6073Duplicated261.9181.0NY_Scal100_v1.27980.1AP-5 complex subunit sigma-1JBrowse
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