BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75852at6073Complete964.5543.0aint_s0055.g96.t1anaphase-promoting complex subunit 7JBrowse
75861at6073Complete402.2256.0aint_s0445.g13.t1pituitary homeobox 2-likeJBrowse
75862at6073Fragmented287.2209.0aint_s0679.g2.t1F-box/LRR-repeat protein 5JBrowse
75871at6073Complete1215.4726.0aint_s0512.g4.t1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-likeJBrowse
75882at6073Complete813.4437.0aint_s0401.g7.t1membralin-like isoform X1JBrowse
75888at6073Complete441.3293.0aint_s0338.g25.t1stAR-related lipid transfer protein 7, mitochondrialJBrowse
75900at6073Fragmented401.3241.0aint_s0003.g93.t1AAR2 homologJBrowse
75908at6073Complete740.1459.0aint_s0229.g1.t1uncharacterized protein LOC116298666JBrowse
75910at6073Complete224.3138.0aint_s0056.g28.t1Cytochrome c oxidase subunitJBrowse
75912at6073Complete651.5334.0aint_s0103.g3.t1E3 ubiquitin-protein ligase RING2-likeJBrowse
75915at6073Complete748.4441.0aint_s0355.g11.t1phospholipase D3-likeJBrowse
75916at6073Duplicated884.7525.0aint_s0087.g35.t2protein SERAC1-likeJBrowse
75916at6073Duplicated845.4505.0aint_s0087.g35.t3protein SERAC1-likeJBrowse
75918at6073Complete876.5553.0aint_s0069.g55.t1cell division cycle 7-related protein kinaseJBrowse
75937at6073Complete920.7553.0aint_s0074.g40.t1serine/threonine-protein kinase greatwall-likeJBrowse
75940at6073Complete1367.9838.0aint_s0199.g21.t1exostosin-like 3JBrowse
75946at6073Complete579.7316.0aint_s0356.g27.t1JmjC domain-containing protein 7JBrowse
75956at6073Complete562.5355.0aint_s0368.g6.t1Protein Wnt-6JBrowse
75959at6073Duplicated633.0376.0aint_s0251.g22.t2Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated597.9376.0aint_s0251.g22.t1Arginyl-tRNA--protein transferase 1JBrowse
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