BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76009at6073Complete855.8571.0alor_g10423.t1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Complete1035.8631.0alor_g26945.t1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Fragmented674.6458.0alor_g3949.t1Progesterone-induced-blocking factor 1JBrowse
76027at6073Complete412.4243.0alor_g10274.t1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76028at6073Complete364.6220.0alor_g21984.t1bcl-2 homologous antagonist killerJBrowse
76032at6073Fragmented295.2195.0alor_g19379.t1AN1-type zinc finger protein 1JBrowse
76033at6073Complete969.7644.0alor_g22083.t1CyclinJBrowse
76034at6073Complete242.5164.0alor_g3542.t1protein LSM12 homologJBrowse
76036at6073Complete723.0428.0alor_g12570.t1chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
76038at6073Complete321.9183.0alor_g22991.t1SNAREJBrowse
76040at6073Complete1605.5932.0alor_g11607.t1GPI ethanolamine phosphate transferase 1JBrowse
76041at6073Complete621.6356.0alor_g21389.t1protein O-mannose kinase-likeJBrowse
76047at6073Complete839.9484.0alor_g16223.t1frizzled-4JBrowse
76049at6073Fragmented457.4296.0alor_g1713.t1integral membrane protein GPR137B-likeJBrowse
76056at6073Complete319.5233.0alor_g9081.t1high mobility group protein B3-likeJBrowse
76060at6073Complete316.1179.0alor_g16307.t1acyl-CoA-binding domain-containing protein 2JBrowse
76070at6073Duplicated627.9392.0alor_g25743.t1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76070at6073Duplicated583.8392.0alor_g25743.t2KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76070at6073Duplicated591.6362.0alor_g25743.t3KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76078at6073Duplicated283.9191.0alor_g510.t1transmembrane protein 199JBrowse
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