BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76009at6073Duplicated1129.1699.0FUN_043419-T2E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76009at6073Duplicated1129.1699.0FUN_043419-T3E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76009at6073Duplicated1129.0699.0FUN_043419-T1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Duplicated1033.1631.0FUN_007864-T1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76012at6073Duplicated964.8600.0FUN_007864-T2arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Complete1278.9781.0FUN_024567-T1Progesterone-induced-blocking factor 1JBrowse
76027at6073Duplicated408.0243.0FUN_039317-T1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76027at6073Duplicated406.8243.0FUN_025248-T1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76028at6073Complete322.2185.0FUN_001155-T1bcl-2 homologous antagonist killerJBrowse
76032at6073Complete365.3251.0FUN_040987-T1AN1-type zinc finger protein 1JBrowse
76033at6073Complete1031.0644.0FUN_034015-T1CyclinJBrowse
76034at6073Complete246.2164.0FUN_026183-T1protein LSM12 homologJBrowse
76036at6073Complete724.0431.0FUN_025783-T1chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
76038at6073Complete374.0216.0FUN_008435-T1SNAREJBrowse
76040at6073Complete1636.6932.0FUN_000620-T1GPI ethanolamine phosphate transferase 1JBrowse
76041at6073Complete622.4356.0FUN_001618-T1protein O-mannose kinase-likeJBrowse
76042at6073Complete864.3497.0FUN_042590-T1potassium voltage-gated channel Shaw-likeJBrowse
76047at6073Complete886.4530.0FUN_011854-T1frizzled-4JBrowse
76049at6073Duplicated596.9375.0FUN_008498-T2integral membrane protein GPR137B-likeJBrowse
76049at6073Duplicated547.1323.0FUN_008498-T1integral membrane protein GPR137B-likeJBrowse
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