BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77628at6073Fragmented161.2124.0pspe_0.1.m1.44519.m1osteopetrosis-associated transmembrane protein 1JBrowse
77639at6073Complete977.4687.0pspe_0.1.m1.63720.m1MICOS complex subunit MIC60JBrowse
77646at6073Fragmented853.2689.0pspe_0.1.m1.29942.m1centlein-likeJBrowse
77652at6073Complete599.4403.0pspe_0.1.m1.8251.m1ribosome biogenesis protein NOP53-likeJBrowse
77659at6073Complete975.7701.0pspe_0.1.m1.16764.m1GRIP and coiled-coil domain-containing protein 1JBrowse
77662at6073Complete581.7443.0pspe_0.1.m1.44937.m1mRNA-decapping enzyme 1A-likeJBrowse
77664at6073Complete371.1202.0pspe_0.1.m1.17049.m1microcephalin-likeJBrowse
77665at6073Complete761.9575.0pspe_0.1.m1.51317.m1heterogeneous nuclear ribonucleoprotein U-likeJBrowse
77683at6073Complete520.5361.0pspe_0.1.m1.25911.m1male-specific lethal 3 homologJBrowse
77690at6073Complete295.1194.0pspe_0.1.m1.22223.m1AP-1 complex-associated regulatory proteinJBrowse
77699at6073Complete1266.9939.0pspe_0.1.m1.39839.m1rho GTPase-activating protein 100F-likeJBrowse
77723at6073Complete529.4367.0pspe_0.1.m1.19835.m1microprocessor complex subunit DGCR8-likeJBrowse
77725at6073Complete265.3182.0pspe_0.1.m1.16673.m1RRP15-like proteinJBrowse
77731at6073Complete1037.0744.0pspe_0.1.m1.56004.m1uncharacterized protein LOC116304239JBrowse
77733at6073Complete740.4700.0pspe_0.1.m1.52357.m1KAT8 regulatory NSL complex subunit 1-likeJBrowse
77782at6073Complete327.3327.0pspe_0.1.m1.43584.m1plasminogen activator inhibitor 1 RNA-binding protein-likeJBrowse
77815at6073Complete550.2563.0pspe_0.1.m1.32955.m1Transcription factor TFIIIB component BJBrowse
77845at6073Complete227.2218.0pspe_0.1.m1.24207.m1syndecan-2JBrowse
77846at6073Complete427.3311.0pspe_0.1.m1.16638.m1Ubiquitin-associated protein 1JBrowse
77849at6073Complete481.8530.0pspe_0.1.m1.36678.m1protein transport protein Sec16A-likeJBrowse
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