BUSCO Gene Details in Acropora florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.3% [S: 68.3%, D: 12.0%] F: 11.1%, M: 8.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,571 (80.3%)2,187 (68.3%)384 (12.0%)355 (11.1%)277 (8.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora florida: 3,400 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75959at6073Duplicated631.9376.0aflo_s0055.g72.t3Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated630.1376.0aflo_s1174.g2.t2Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated599.6376.0aflo_s0055.g72.t1Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated596.9376.0aflo_s0055.g72.t2Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated596.7376.0aflo_s1174.g2.t1Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated593.9376.0aflo_s1174.g2.t3Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated605.2367.0aflo_s1174.g2.t4Arginyl-tRNA--protein transferase 1JBrowse
75962at6073Duplicated246.2166.0aflo_s0010.g109.t1mediator of RNA polymerase II transcription subunit 19JBrowse
75962at6073Duplicated246.2166.0aflo_s0683.g1.t1mediator of RNA polymerase II transcription subunit 19JBrowse
75974at6073Complete984.9593.0aflo_s0159.g9.t1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75975at6073Complete771.9446.0aflo_s0142.g136.t1transmembrane protein 161B-likeJBrowse
75977at6073Complete658.8428.0aflo_s0571.g4.t1Epsin-2JBrowse
75985at6073Complete273.4171.0aflo_s0354.g9.t1EKC/KEOPS complex subunit Tprkb-likeJBrowse
75987at6073Complete754.7475.0aflo_s0030.g27.t1spartin-likeJBrowse
76002at6073Complete1117.0705.0aflo_s0235.g54.t1E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76005at6073Complete1360.4909.0aflo_s0003.g112.t1Ribitol-5-phosphate transferase FKTN, N-terminalJBrowse
76009at6073Duplicated1210.2699.0aflo_s0231.g11.t3E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76009at6073Duplicated1210.1699.0aflo_s0231.g11.t2E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76009at6073Duplicated1125.8699.0aflo_s0231.g11.t1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Complete1029.3631.0aflo_s0002.g29.t1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
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