BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75777at6073Complete1176.7735.0agem_s0001.g136.t1TBC1 domain family member 12JBrowse
75783at6073Complete1939.71123.0agem_s0244.g14.t1Sister chromatid cohesion protein PDS5 AJBrowse
75790at6073Duplicated750.4427.0agem_s0262.g2.t2traB domain-containing proteinJBrowse
75790at6073Duplicated750.5426.0agem_s0262.g2.t1traB domain-containing proteinJBrowse
75793at6073Complete689.4408.0agem_s0076.g79.t1headcase proteinJBrowse
75797at6073Complete935.1525.0agem_s0027.g71.t1protein RFT1 homologJBrowse
75798at6073Complete2052.81241.0agem_s0089.g48.t1pleckstrin homology-like domain family B member 1JBrowse
75801at6073Duplicated886.2464.0agem_s0007.g114.t2rho GTPase-activating protein 44JBrowse
75801at6073Duplicated860.4464.0agem_s0007.g114.t1rho GTPase-activating protein 44JBrowse
75806at6073Duplicated395.6209.0agem_s0010.g202.t2dnaJ homolog subfamily C member 5-likeJBrowse
75806at6073Duplicated384.2196.0agem_s0010.g202.t1dnaJ homolog subfamily C member 5-likeJBrowse
75814at6073Complete648.6322.0agem_s0104.g19.t3transcriptional repressor protein YY1-likeJBrowse
75815at6073Complete347.6200.0agem_s0090.g42.t126S proteasome non-ATPase regulatory subunit 9JBrowse
75820at6073Complete667.9336.0agem_s0044.g22.t1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75831at6073Complete652.1411.0agem_s0058.g91.t1tumor susceptibility gene 101 protein-likeJBrowse
75842at6073Fragmented132.687.0agem_s0271.g11.t1mediator of RNA polymerase II transcription subunit 21JBrowse
75846at6073Complete514.1290.0agem_s0033.g23.t1transmembrane protein 19JBrowse
75851at6073Complete1091.5685.0agem_s0124.g37.t1WD repeat-containing protein 91JBrowse
75852at6073Complete965.3543.0agem_s0002.g335.t1anaphase-promoting complex subunit 7JBrowse
75861at6073Complete402.2256.0agem_s0036.g110.t1pituitary homeobox 2-likeJBrowse
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