BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75962at6073Complete246.2166.0aint_s0063.g12.t1mediator of RNA polymerase II transcription subunit 19JBrowse
75968at6073Complete1387.8772.0aint_s0096.g50.t1helicase POLQ-likeJBrowse
75974at6073Complete1190.1671.0aint_s0060.g33.t1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75977at6073Complete656.9428.0aint_s0178.g46.t1Epsin-2JBrowse
75985at6073Complete272.6171.0aint_s0089.g70.t1EKC/KEOPS complex subunit Tprkb-likeJBrowse
75987at6073Complete758.7475.0aint_s0336.g7.t1spartin-likeJBrowse
76002at6073Complete1068.5670.0aint_s0015.g77.t1E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76005at6073Complete1362.4909.0aint_s0135.g7.t1Ribitol-5-phosphate transferase FKTN, N-terminalJBrowse
76009at6073Duplicated1223.6699.0aint_s0075.g34.t2E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76009at6073Duplicated1223.5699.0aint_s0075.g34.t3E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76009at6073Duplicated1117.3699.0aint_s0075.g34.t1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Complete1030.6631.0aint_s0217.g29.t1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Fragmented958.1539.0aint_s1240.g1.t1Progesterone-induced-blocking factor 1JBrowse
76027at6073Complete409.6243.0aint_s0188.g13.t1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76028at6073Complete362.5220.0aint_s0051.g45.t1bcl-2 homologous antagonist killerJBrowse
76032at6073Complete366.4251.0aint_s0254.g27.t1AN1-type zinc finger protein 1JBrowse
76033at6073Complete1030.1644.0aint_s0002.g66.t1CyclinJBrowse
76034at6073Complete245.3164.0aint_s0125.g37.t1protein LSM12 homologJBrowse
76036at6073Complete724.5432.0aint_s0113.g24.t1chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
76038at6073Complete373.1216.0aint_s0293.g6.t1SNAREJBrowse
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