BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76078at6073Duplicated282.9191.0alor_g510.t2transmembrane protein 199JBrowse
76083at6073Complete432.9246.0alor_g10032.t1endonuclease V-likeJBrowse
76085at6073Complete369.1267.0alor_g13222.t1SynaptotagminJBrowse
76086at6073Complete704.6430.0alor_g21317.t1cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76096at6073Complete462.9296.0alor_g24769.t1zinc transporter ZIP1JBrowse
76101at6073Complete311.2200.0alor_g10357.t1Zinc finger Ran-binding domain-containing protein 2JBrowse
76104at6073Complete448.9279.0alor_g25198.t1dnaJ homolog subfamily C member 17JBrowse
76107at6073Complete401.9256.0alor_g15080.t1coiled-coil domain-containing protein 189JBrowse
76113at6073Complete1807.11157.0alor_g2886.t1protein timeless homologJBrowse
76125at6073Complete649.1415.0alor_g6206.t1dynein assembly factor 4, axonemalJBrowse
76132at6073Complete639.5368.0alor_g9710.t1transcription factor Sp5-likeJBrowse
76135at6073Complete778.7468.0alor_g15760.t1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Complete600.0360.0alor_g20610.t1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Complete575.5336.0alor_g1563.t1O(6)-methylguanine-induced apoptosis 2JBrowse
76157at6073Complete1362.6836.0alor_g7189.t1integrator complex subunit 6JBrowse
76158at6073Complete477.6273.0alor_g21674.t1putative RNA-binding protein Luc7-like 2JBrowse
76172at6073Complete791.4509.0alor_g24025.t1peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76175at6073Duplicated700.3409.0alor_g26955.t1homeobox protein Meis1-likeJBrowse
76175at6073Duplicated673.4409.0alor_g26955.t2homeobox protein Meis1-likeJBrowse
76185at6073Complete1400.1901.0alor_g25814.t1Centrosomal of 120 kDaJBrowse
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