BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76041at6073Complete623.6356.0aint_s0234.g14.t1protein O-mannose kinase-likeJBrowse
76042at6073Complete865.1496.0aint_s0174.g12.t1potassium voltage-gated channel Shaw-likeJBrowse
76047at6073Complete889.4531.0aint_s0191.g17.t1frizzled-4JBrowse
76049at6073Complete597.1375.0aint_s0265.g31.t1integral membrane protein GPR137B-likeJBrowse
76056at6073Complete316.6233.0aint_s0402.g22.t1high mobility group protein B3-likeJBrowse
76060at6073Complete314.5179.0aint_s0086.g30.t1acyl-CoA-binding domain-containing protein 2JBrowse
76070at6073Duplicated795.7392.0aint_s0063.g15.t1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76070at6073Duplicated754.5392.0aint_s0063.g15.t2KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76078at6073Duplicated284.0191.0aint_s0649.g8.t2transmembrane protein 199JBrowse
76078at6073Duplicated283.0191.0aint_s0649.g8.t1transmembrane protein 199JBrowse
76083at6073Complete443.4252.0aint_s0101.g31.t1endonuclease V-likeJBrowse
76085at6073Complete302.9226.0aint_s0385.g6.t1SynaptotagminJBrowse
76086at6073Duplicated760.8451.0aint_s0098.g17.t2cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76086at6073Duplicated704.0430.0aint_s0098.g17.t1cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76087at6073Duplicated377.8276.0aint_s0096.g23.t1transformer-2 protein homolog beta-likeJBrowse
76087at6073Duplicated376.2274.0aint_s0096.g23.t2transformer-2 protein homolog beta-likeJBrowse
76096at6073Complete462.5296.0aint_s0031.g72.t1zinc transporter ZIP1JBrowse
76101at6073Complete319.0180.0aint_s0355.g34.t1Zinc finger Ran-binding domain-containing protein 2JBrowse
76104at6073Complete618.4279.0aint_s0003.g157.t3dnaJ homolog subfamily C member 17JBrowse
76107at6073Fragmented319.3195.0aint_s0382.g8.t1coiled-coil domain-containing protein 189JBrowse
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