BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76135at6073Complete841.1489.0FUN_040956-T1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Duplicated601.8360.0FUN_036967-T1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76143at6073Duplicated568.4358.0FUN_036967-T2ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Duplicated577.7336.0FUN_010558-T1O(6)-methylguanine-induced apoptosis 2JBrowse
76155at6073Duplicated577.4336.0FUN_010558-T2O(6)-methylguanine-induced apoptosis 2JBrowse
76155at6073Duplicated577.0336.0FUN_010558-T3O(6)-methylguanine-induced apoptosis 2JBrowse
76157at6073Fragmented936.4464.0FUN_041827-T1integrator complex subunit 6JBrowse
76158at6073Complete551.9311.0FUN_038697-T1putative RNA-binding protein Luc7-like 2JBrowse
76172at6073Complete888.1485.0FUN_012273-T1peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76175at6073Complete700.2409.0FUN_007849-T1homeobox protein Meis1-likeJBrowse
76185at6073Fragmented837.8496.0FUN_005331-T1Centrosomal of 120 kDaJBrowse
76188at6073Complete352.8186.0FUN_038140-T1Golgi apparatus membrane protein TVP23 homolog B-likeJBrowse
76194at6073Complete561.0367.0FUN_008529-T1E3 ubiquitin-protein ligase HakaiJBrowse
76199at6073Complete844.9459.0FUN_041510-T1thiamine transporter 1JBrowse
76203at6073Complete1240.7693.0FUN_012418-T1MacoilinJBrowse
76204at6073Complete1986.51230.0FUN_036180-T1serine/threonine-protein kinase ULK4 isoform X1JBrowse
76222at6073Complete296.3163.0FUN_001448-T1transmembrane protein 128JBrowse
76225at6073Complete565.1366.0FUN_001211-T1putative neutral sphingomyelinaseJBrowse
76228at6073Complete949.1618.0FUN_005890-T1F-BAR and double SH3 domains protein 2JBrowse
76229at6073Complete336.7195.0FUN_005232-T1pyroglutamyl-peptidase 1JBrowse
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