BUSCO Gene Details in Acropora awi

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora awiBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 66.7%, D: 12.4%] F: 12.3%, M: 8.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,532 (79.1%)2,136 (66.7%)396 (12.4%)394 (12.3%)277 (8.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora awi: 3,415 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76032at6073Complete366.4251.0aawi_s0419.g5.t1AN1-type zinc finger protein 1JBrowse
76033at6073Complete1028.5644.0aawi_s0030.g105.t1CyclinJBrowse
76034at6073Fragmented167.7116.0aawi_s0034.g10.t1protein LSM12 homologJBrowse
76036at6073Complete724.5432.0aawi_s0039.g151.t1chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
76038at6073Complete360.1216.0aawi_s0062.g78.t1SNAREJBrowse
76040at6073Complete1631.6932.0aawi_s0048.g107.t1GPI ethanolamine phosphate transferase 1JBrowse
76041at6073Complete621.0356.0aawi_s0052.g45.t1protein O-mannose kinase-likeJBrowse
76042at6073Complete863.9492.0aawi_s0224.g30.t1potassium voltage-gated channel Shaw-likeJBrowse
76047at6073Complete889.4531.0aawi_s0093.g43.t1frizzled-4JBrowse
76049at6073Complete593.3375.0aawi_s0039.g86.t1integral membrane protein GPR137B-likeJBrowse
76056at6073Complete317.0233.0aawi_s0206.g63.t1high mobility group protein B3-likeJBrowse
76060at6073Complete314.7179.0aawi_s0196.g10.t1acyl-CoA-binding domain-containing protein 2JBrowse
76070at6073Fragmented404.6255.0aawi_s0032.g61.t1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76078at6073Duplicated282.3191.0aawi_s0042.g93.t2transmembrane protein 199JBrowse
76078at6073Duplicated281.3191.0aawi_s0042.g93.t1transmembrane protein 199JBrowse
76083at6073Complete445.0252.0aawi_s0158.g45.t1endonuclease V-likeJBrowse
76085at6073Complete302.9226.0aawi_s0357.g8.t1SynaptotagminJBrowse
76086at6073Duplicated762.7451.0aawi_s0113.g75.t2cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76086at6073Duplicated704.0430.0aawi_s0113.g75.t1cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76087at6073Complete364.5266.0aawi_s0049.g14.t1transformer-2 protein homolog beta-likeJBrowse
Go to page: of 171 pages
TOP