BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76113at6073Complete1765.01077.0aint_s0528.g15.t1protein timeless homologJBrowse
76125at6073Complete649.0415.0aint_s0015.g59.t1dynein assembly factor 4, axonemalJBrowse
76132at6073Complete642.8368.0aint_s0025.g14.t1transcription factor Sp5-likeJBrowse
76135at6073Complete839.5486.0aint_s0508.g10.t1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Complete601.0355.0aint_s0012.g5.t1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Complete577.4336.0aint_s0026.g8.t1O(6)-methylguanine-induced apoptosis 2JBrowse
76157at6073Duplicated1400.3849.0aint_s0400.g13.t1integrator complex subunit 6JBrowse
76157at6073Duplicated1370.9849.0aint_s0400.g13.t2integrator complex subunit 6JBrowse
76158at6073Duplicated551.9311.0aint_s0042.g13.t2putative RNA-binding protein Luc7-like 2JBrowse
76158at6073Duplicated545.1311.0aint_s0042.g13.t3putative RNA-binding protein Luc7-like 2JBrowse
76158at6073Duplicated477.6273.0aint_s0042.g13.t1putative RNA-binding protein Luc7-like 2JBrowse
76172at6073Duplicated911.7546.0aint_s0019.g26.t1peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76172at6073Duplicated890.3493.0aint_s0019.g26.t2peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76175at6073Duplicated701.9409.0aint_s0217.g15.t1homeobox protein Meis1-likeJBrowse
76175at6073Duplicated701.7409.0aint_s0217.g15.t2homeobox protein Meis1-likeJBrowse
76182at6073Complete387.8261.0aint_s0462.g7.t1Cell division cycle-associated protein 7JBrowse
76185at6073Fragmented925.5631.0aint_s0038.g42.t1Centrosomal of 120 kDaJBrowse
76188at6073Complete354.5185.0aint_s0072.g27.t1Golgi apparatus membrane protein TVP23 homolog B-likeJBrowse
76194at6073Complete557.9367.0aint_s0244.g38.t1E3 ubiquitin-protein ligase HakaiJBrowse
76199at6073Complete844.8459.0aint_s0050.g61.t1thiamine transporter 1JBrowse
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