BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76393at6073Complete478.2316.0NY_Scal100_v1.24812.1testis-expressed protein 9JBrowse
76394at6073Fragmented292.4233.0NY_Scal100_v1.35438.1pleckstrin homology domain-containing family A member 1-likeJBrowse
76398at6073Complete1094.3743.0NY_Scal100_v1.35011.1S1 RNA-binding domain-containing protein 1JBrowse
76410at6073Complete242.8169.0NY_Scal100_v1.11286.1uncharacterized protein C5orf49-likeJBrowse
76416at6073Complete553.7319.0NY_Scal100_v1.45778.1UDP-N-acetylglucosamine transporterJBrowse
76430at6073Fragmented804.1560.0NY_Scal100_v1.18551.1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76433at6073Complete616.5424.0NY_Scal100_v1.17284.1E3 ubiquitin-protein ligase MGRN1JBrowse
76438at6073Complete1611.81019.0NY_Scal100_v1.11097.1Structural maintenance of chromosomes protein 6JBrowse
76442at6073Complete775.1477.0NY_Scal100_v1.51755.1tetratricopeptide repeat protein 29-likeJBrowse
76443at6073Fragmented169.6147.0NY_Scal100_v1.31756.1tumor protein p53-inducible nuclear protein 2JBrowse
76456at6073Fragmented760.6411.0NY_Scal100_v1.26152.1twinkle protein, mitochondrial-likeJBrowse
76457at6073Complete1330.6853.0NY_Scal100_v1.51522.1protein CIP2A homologJBrowse
76463at6073Complete1010.9638.0NY_Scal100_v1.5480.1short transient receptor potential channel 4-likeJBrowse
76464at6073Complete345.9254.0NY_Scal100_v1.49344.1syntaxin-18JBrowse
76465at6073Fragmented568.1409.0NY_Scal100_v1.50060.1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Duplicated1429.3858.0NY_Scal100_v1.49508.1histone-lysine N-methyltransferase NSD2JBrowse
76471at6073Duplicated1363.4842.0NY_Scal100_v1.11704.1histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Complete709.7505.0NY_Scal100_v1.20207.1UBX domain-containing protein 7JBrowse
76480at6073Complete533.4369.0NY_Scal100_v1.34373.1DDB1- and CUL4-associated factor 10JBrowse
76484at6073Complete1406.11005.0NY_Scal100_v1.5898.1serine/threonine-protein kinase SIK3-likeJBrowse
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