BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76203at6073Duplicated1235.6693.0aint_s0001.g6.t1MacoilinJBrowse
76203at6073Duplicated1228.8687.0aint_s0001.g6.t2MacoilinJBrowse
76204at6073Complete1991.61230.0aint_s0076.g31.t1serine/threonine-protein kinase ULK4 isoform X1JBrowse
76216at6073Fragmented203.6127.0aint_s0332.g7.t1Box C/D snoRNA protein 1JBrowse
76222at6073Complete296.4163.0aint_s0266.g35.t1transmembrane protein 128JBrowse
76225at6073Complete568.1366.0aint_s0037.g45.t1putative neutral sphingomyelinaseJBrowse
76228at6073Complete956.4618.0aint_s0027.g29.t1F-BAR and double SH3 domains protein 2JBrowse
76229at6073Complete339.0195.0aint_s0212.g49.t1pyroglutamyl-peptidase 1JBrowse
76237at6073Fragmented225.4157.0aint_s0581.g9.t2stAR-related lipid transfer protein 3-likeJBrowse
76239at6073Complete367.0214.0aint_s0101.g62.t1UPF0193 protein EVG1JBrowse
76243at6073Duplicated634.6416.0aint_s0138.g2.t2AT-rich interactive domain-containing protein 3C-likeJBrowse
76243at6073Duplicated634.6415.0aint_s0138.g2.t1AT-rich interactive domain-containing protein 3C-likeJBrowse
76246at6073Complete563.5314.0aint_s0819.g6.t1zinc transporter Slc39a7-likeJBrowse
76254at6073Complete972.9518.0aint_s0042.g45.t1cilia- and flagella-associated protein 100JBrowse
76258at6073Fragmented1017.3474.0aint_s0074.g24.t2Synaptojanin-1JBrowse
76265at6073Complete457.5329.0aint_s0397.g16.t1zinc finger CCCH domain-containing protein 15JBrowse
76271at6073Complete900.8558.0aint_s0061.g31.t1DNA polymerase etaJBrowse
76277at6073Complete604.5400.0aint_s0003.g112.t1leucine-rich repeat protein 1JBrowse
76286at6073Complete752.9478.0aint_s0272.g37.t1AP-5 complex subunit mu-1JBrowse
76291at6073Duplicated978.8536.0aint_s0836.g8.t1peroxisomal targeting signal 1 receptor-likeJBrowse
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