BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76411at6073Complete863.9562.0alor_g25943.t1protein spire homolog 1JBrowse
76416at6073Complete545.8297.0alor_g19329.t1UDP-N-acetylglucosamine transporterJBrowse
76430at6073Complete1025.6702.0alor_g19409.t1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76433at6073Complete683.6434.0alor_g20160.t1E3 ubiquitin-protein ligase MGRN1JBrowse
76438at6073Complete1764.31019.0alor_g6571.t1Structural maintenance of chromosomes protein 6JBrowse
76442at6073Complete834.7475.0alor_g10872.t1tetratricopeptide repeat protein 29-likeJBrowse
76443at6073Fragmented147.7142.0alor_g1881.t1tumor protein p53-inducible nuclear protein 2JBrowse
76456at6073Fragmented1099.3611.0alor_g3340.t1twinkle protein, mitochondrial-likeJBrowse
76457at6073Complete1088.6781.0alor_g11576.t1protein CIP2A homologJBrowse
76460at6073Complete567.9395.0alor_g8353.t1F-box/LRR-repeat protein 2-likeJBrowse
76464at6073Complete552.2311.0alor_g21269.t1syntaxin-18JBrowse
76465at6073Complete898.5584.0alor_g10609.t1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Complete1524.2908.0alor_g10589.t1histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Complete821.3509.0alor_g17838.t1UBX domain-containing protein 7JBrowse
76480at6073Complete565.4369.0alor_g10284.t1DDB1- and CUL4-associated factor 10JBrowse
76484at6073Complete1638.41097.0alor_g13785.t1serine/threonine-protein kinase SIK3-likeJBrowse
76490at6073Complete554.8371.0alor_g14145.t1protein Njmu-R1-likeJBrowse
76492at6073Complete716.8442.0alor_g14614.t1UBX domain-containing protein 6-likeJBrowse
76494at6073Fragmented456.3270.0alor_g11991.t1F-box only protein 4-likeJBrowse
76502at6073Complete1020.1619.0alor_g9970.t1uncharacterized protein LOC116292841JBrowse
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