BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76125at6073Complete649.4415.0amic_s0139.g49.t1dynein assembly factor 4, axonemalJBrowse
76132at6073Complete641.9368.0amic_s0042.g12.t1transcription factor Sp5-likeJBrowse
76135at6073Complete835.9486.0amic_s0167.g14.t1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Duplicated598.8360.0amic_s0074.g46.t1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76143at6073Duplicated577.5360.0amic_s0074.g46.t3ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76143at6073Duplicated571.3353.0amic_s0074.g46.t2ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Complete576.5336.0amic_s0248.g6.t1O(6)-methylguanine-induced apoptosis 2JBrowse
76157at6073Fragmented720.6366.0amic_s0023.g180.t1integrator complex subunit 6JBrowse
76158at6073Duplicated555.5311.0amic_s0008.g116.t1putative RNA-binding protein Luc7-like 2JBrowse
76158at6073Duplicated479.7273.0amic_s0008.g116.t2putative RNA-binding protein Luc7-like 2JBrowse
76172at6073Duplicated913.0546.0amic_s0024.g46.t2peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76172at6073Duplicated888.5485.0amic_s0024.g46.t1peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76175at6073Duplicated700.5409.0amic_s0007.g23.t1homeobox protein Meis1-likeJBrowse
76175at6073Duplicated700.3409.0amic_s0007.g23.t2homeobox protein Meis1-likeJBrowse
76182at6073Complete388.0261.0amic_s0364.g15.t1Cell division cycle-associated protein 7JBrowse
76185at6073Complete1566.4958.0amic_s0094.g52.t1Centrosomal of 120 kDaJBrowse
76188at6073Complete356.4185.0amic_s0246.g18.t1Golgi apparatus membrane protein TVP23 homolog B-likeJBrowse
76194at6073Complete561.0367.0amic_s0288.g15.t1E3 ubiquitin-protein ligase HakaiJBrowse
76199at6073Complete848.2459.0amic_s0030.g8.t1thiamine transporter 1JBrowse
76203at6073Duplicated1239.0693.0amic_s0025.g126.t2MacoilinJBrowse
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