BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76291at6073Duplicated916.1536.0aint_s0836.g8.t2peroxisomal targeting signal 1 receptor-likeJBrowse
76298at6073Fragmented798.3413.0aint_s4826.g1.t1zinc finger and BTB domain-containing protein 24-likeJBrowse
76299at6073Complete1787.51267.0aint_s0033.g73.t1DNA topoisomerase 2-binding protein 1JBrowse
76306at6073Complete1022.1710.0aint_s0020.g112.t1terminal nucleotidyltransferase 4B-likeJBrowse
76315at6073Complete943.8712.0aint_s0350.g10.t2transmembrane protein 214-AJBrowse
76327at6073Complete465.2286.0aint_s0178.g19.t1coiled-coil domain-containing protein 166JBrowse
76329at6073Complete2231.91096.0aint_s0144.g23.t1F-actin-methionine sulfoxide oxidase MICAL2-likeJBrowse
76343at6073Fragmented480.1314.0aint_s0069.g99.t1F-box only protein 30JBrowse
76345at6073Duplicated428.2284.0aint_s0249.g7.t1ribonuclease H2 subunit BJBrowse
76345at6073Duplicated419.2284.0aint_s0249.g7.t2ribonuclease H2 subunit BJBrowse
76350at6073Complete490.5283.0aint_s0067.g64.t1STAGA complex 65 subunit gamma-likeJBrowse
76353at6073Complete727.6453.0aint_s0272.g31.t1tRNA pseudouridine synthase Pus10-likeJBrowse
76363at6073Complete366.8239.0aint_s0094.g30.t1Synaptosomal-associated proteinJBrowse
76365at6073Complete591.2425.0aint_s0496.g13.t1palmitoleoyl-protein carboxylesterase notum1a-likeJBrowse
76374at6073Fragmented209.0169.0aint_s0178.g4.t1WW domain-binding protein 2JBrowse
76393at6073Complete504.0315.0aint_s0193.g39.t1testis-expressed protein 9JBrowse
76394at6073Complete372.8268.0aint_s0017.g97.t1pleckstrin homology domain-containing family A member 1-likeJBrowse
76398at6073Fragmented612.5367.0aint_s0292.g13.t1S1 RNA-binding domain-containing protein 1JBrowse
76410at6073Complete303.6178.0aint_s0328.g17.t2uncharacterized protein C5orf49-likeJBrowse
76411at6073Complete858.9562.0aint_s0403.g13.t1protein spire homolog 1JBrowse
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