BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76504at6073Complete1163.3782.0alor_g11932.t1protein inturned-likeJBrowse
76516at6073Complete719.9492.0alor_g19482.t1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76519at6073Complete1005.6626.0alor_g21276.t1E3 ubiquitin-protein ligase RNF103JBrowse
76525at6073Complete584.0401.0alor_g16259.t1glucocorticoid-induced transcript 1 protein-likeJBrowse
76527at6073Fragmented1054.1230.0alor_g5602.t1neurogenic locus notch homolog protein 1-likeJBrowse
76533at6073Complete549.8382.0alor_g9026.t1Charged multivesicular body protein 7JBrowse
76536at6073Complete1183.0810.0alor_g1237.t1transcription initiation factor TFIID subunit 4JBrowse
76543at6073Complete543.8329.0alor_g421.t1forkhead box protein N4-likeJBrowse
76547at6073Complete611.2434.0alor_g24664.t1tubulin-specific chaperone E-likeJBrowse
76551at6073Complete481.2315.0alor_g18225.t1N(6)-adenine-specific methyltransferase METTL4-likeJBrowse
76560at6073Complete496.2326.0alor_g11916.t1methionyl-tRNA formyltransferase, mitochondrialJBrowse
76564at6073Complete285.4197.0alor_g24708.t1Complement component 1 Q subcomponent-binding, mitochondrialJBrowse
76577at6073Complete257.3163.0alor_g21941.t139S ribosomal protein L21, mitochondrial-likeJBrowse
76581at6073Complete341.8214.0alor_g23588.t1RWD domain-containing protein 1JBrowse
76593at6073Complete989.5770.0alor_g2234.t1IQ motif and SEC7 domain-containing protein 1 isoform X1JBrowse
76595at6073Complete458.9320.0alor_g1857.t1sorting nexin-20JBrowse
76603at6073Complete1000.3596.0alor_g4286.t1poly(A)-specific ribonuclease PARNJBrowse
76611at6073Duplicated233.7155.0alor_g13240.t1chromobox protein homolog 1JBrowse
76611at6073Duplicated233.7155.0alor_g365.t1chromobox protein homolog 1JBrowse
76612at6073Complete510.0478.0alor_g11316.t1apoptosis-stimulating of p53 protein 2JBrowse
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