BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76203at6073Duplicated1232.3687.0amic_s0025.g126.t1MacoilinJBrowse
76204at6073Complete1993.31230.0amic_s0002.g433.t1serine/threonine-protein kinase ULK4 isoform X1JBrowse
76216at6073Fragmented137.8111.0amic_s0176.g29.t1Box C/D snoRNA protein 1JBrowse
76222at6073Complete296.3163.0amic_s0182.g71.t1transmembrane protein 128JBrowse
76225at6073Complete565.3366.0amic_s0001.g123.t1putative neutral sphingomyelinaseJBrowse
76228at6073Complete947.0618.0amic_s0234.g22.t1F-BAR and double SH3 domains protein 2JBrowse
76229at6073Complete341.1195.0amic_s0149.g21.t1pyroglutamyl-peptidase 1JBrowse
76233at6073Fragmented323.0233.0amic_s0021.g6.t1protein odr-4 homologJBrowse
76237at6073Duplicated635.2382.0amic_s0107.g32.t3stAR-related lipid transfer protein 3-likeJBrowse
76237at6073Duplicated574.9382.0amic_s0107.g32.t1stAR-related lipid transfer protein 3-likeJBrowse
76237at6073Duplicated573.5382.0amic_s0107.g32.t2stAR-related lipid transfer protein 3-likeJBrowse
76239at6073Complete367.8214.0amic_s0005.g99.t1UPF0193 protein EVG1JBrowse
76243at6073Duplicated635.0416.0amic_s0100.g42.t2AT-rich interactive domain-containing protein 3C-likeJBrowse
76243at6073Duplicated623.9416.0amic_s0100.g42.t3AT-rich interactive domain-containing protein 3C-likeJBrowse
76243at6073Duplicated634.8415.0amic_s0100.g42.t1AT-rich interactive domain-containing protein 3C-likeJBrowse
76246at6073Complete561.4314.0amic_s0200.g22.t1zinc transporter Slc39a7-likeJBrowse
76254at6073Complete972.7518.0amic_s0040.g32.t1cilia- and flagella-associated protein 100JBrowse
76256at6073Complete526.5323.0amic_s0032.g62.t1zinc transporter ZIP13JBrowse
76258at6073Complete2016.41131.0amic_s0014.g201.t1Synaptojanin-1JBrowse
76265at6073Complete531.3328.0amic_s0174.g10.t1zinc finger CCCH domain-containing protein 15JBrowse
Go to page: of 171 pages
TOP