BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76442at6073Complete835.9477.0FUN_006798-T1tetratricopeptide repeat protein 29-likeJBrowse
76443at6073Complete294.2200.0FUN_034958-T1tumor protein p53-inducible nuclear protein 2JBrowse
76456at6073Complete1115.1722.0FUN_033730-T1twinkle protein, mitochondrial-likeJBrowse
76457at6073Complete1562.4914.0FUN_000879-T1protein CIP2A homologJBrowse
76460at6073Complete538.1394.0FUN_006617-T1F-box/LRR-repeat protein 2-likeJBrowse
76463at6073Complete1064.4640.0FUN_029098-T1short transient receptor potential channel 4-likeJBrowse
76464at6073Complete552.1311.0FUN_023121-T1syntaxin-18JBrowse
76465at6073Complete919.4590.0FUN_004512-T1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Duplicated1626.8933.0FUN_023369-T2histone-lysine N-methyltransferase NSD2JBrowse
76471at6073Duplicated1452.9847.0FUN_023369-T1histone-lysine N-methyltransferase NSD2JBrowse
76471at6073Duplicated1455.1827.0FUN_023369-T4histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Complete819.7509.0FUN_027735-T1UBX domain-containing protein 7JBrowse
76484at6073Complete1680.31112.0FUN_041638-T1serine/threonine-protein kinase SIK3-likeJBrowse
76490at6073Complete550.1372.0FUN_038513-T1protein Njmu-R1-likeJBrowse
76492at6073Complete711.9442.0FUN_000972-T1UBX domain-containing protein 6-likeJBrowse
76494at6073Complete607.0381.0FUN_004268-T1F-box only protein 4-likeJBrowse
76499at6073Complete348.0222.0FUN_001011-T1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
76502at6073Complete1020.3619.0FUN_023237-T1uncharacterized protein LOC116292841JBrowse
76504at6073Complete1338.8862.0FUN_024129-T1protein inturned-likeJBrowse
76516at6073Complete819.2544.0FUN_035853-T1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
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