BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76416at6073Complete545.5294.0aint_s0235.g28.t1UDP-N-acetylglucosamine transporterJBrowse
76430at6073Complete1023.7703.0aint_s0259.g8.t1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76433at6073Complete685.2434.0aint_s0186.g6.t1E3 ubiquitin-protein ligase MGRN1JBrowse
76442at6073Complete830.9477.0aint_s0441.g14.t1tetratricopeptide repeat protein 29-likeJBrowse
76443at6073Complete295.5200.0aint_s0362.g7.t1tumor protein p53-inducible nuclear protein 2JBrowse
76456at6073Complete1247.6760.0aint_s0178.g56.t1twinkle protein, mitochondrial-likeJBrowse
76457at6073Duplicated1567.4914.0aint_s0469.g20.t1protein CIP2A homologJBrowse
76457at6073Duplicated1541.2914.0aint_s0469.g20.t2protein CIP2A homologJBrowse
76460at6073Complete568.1395.0aint_s0080.g12.t1F-box/LRR-repeat protein 2-likeJBrowse
76463at6073Complete1063.9640.0aint_s0133.g9.t1short transient receptor potential channel 4-likeJBrowse
76464at6073Complete479.2263.0aint_s0033.g75.t1syntaxin-18JBrowse
76465at6073Complete905.5581.0aint_s0316.g12.t1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Duplicated1909.4933.0aint_s0099.g84.t3histone-lysine N-methyltransferase NSD2JBrowse
76471at6073Duplicated1625.3933.0aint_s0099.g84.t1histone-lysine N-methyltransferase NSD2JBrowse
76471at6073Duplicated1737.2827.0aint_s0099.g84.t4histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Complete818.5509.0aint_s0006.g31.t1UBX domain-containing protein 7JBrowse
76480at6073Complete564.9369.0aint_s0188.g23.t1DDB1- and CUL4-associated factor 10JBrowse
76484at6073Fragmented895.4754.0aint_s4295.g1.t1serine/threonine-protein kinase SIK3-likeJBrowse
76490at6073Fragmented186.899.0aint_s0016.g70.t1protein Njmu-R1-likeJBrowse
76492at6073Complete713.6442.0aint_s0612.g7.t1UBX domain-containing protein 6-likeJBrowse
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