BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76499at6073Complete349.2222.0aint_s0115.g49.t1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
76504at6073Duplicated1337.9858.0aint_s0174.g31.t2protein inturned-likeJBrowse
76504at6073Duplicated1347.0856.0aint_s0174.g31.t1protein inturned-likeJBrowse
76504at6073Duplicated1259.6790.0aint_s0174.g31.t3protein inturned-likeJBrowse
76516at6073Complete789.4521.0aint_s0146.g1.t1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76519at6073Complete1007.1626.0aint_s0033.g84.t1E3 ubiquitin-protein ligase RNF103JBrowse
76525at6073Duplicated640.7430.0aint_s0330.g8.t1glucocorticoid-induced transcript 1 protein-likeJBrowse
76525at6073Duplicated637.9430.0aint_s0330.g8.t2glucocorticoid-induced transcript 1 protein-likeJBrowse
76527at6073Complete849.8675.0aint_s0333.g14.t1neurogenic locus notch homolog protein 1-likeJBrowse
76533at6073Complete550.2382.0aint_s0523.g9.t1Charged multivesicular body protein 7JBrowse
76536at6073Complete1202.6816.0aint_s0320.g10.t1transcription initiation factor TFIID subunit 4JBrowse
76543at6073Complete542.2329.0aint_s0103.g51.t1forkhead box protein N4-likeJBrowse
76545at6073Complete244.5138.0aint_s0073.g42.t1plasminogen receptor (KT)JBrowse
76547at6073Complete756.7498.0aint_s0055.g99.t1tubulin-specific chaperone E-likeJBrowse
76551at6073Complete569.0363.0aint_s0697.g2.t1N(6)-adenine-specific methyltransferase METTL4-likeJBrowse
76564at6073Fragmented180.1117.0aint_s0010.g12.t1Complement component 1 Q subcomponent-binding, mitochondrialJBrowse
76577at6073Fragmented169.0120.0aint_s0051.g3.t139S ribosomal protein L21, mitochondrial-likeJBrowse
76581at6073Fragmented118.791.0aint_s0046.g80.t1RWD domain-containing protein 1JBrowse
76593at6073Duplicated1191.6793.0aint_s0089.g67.t2IQ motif and SEC7 domain-containing protein 1 isoform X1JBrowse
76593at6073Duplicated1191.4790.0aint_s0089.g67.t1IQ motif and SEC7 domain-containing protein 1 isoform X1JBrowse
Go to page: of 170 pages
TOP