BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76365at6073Complete591.0424.0amic_s0013.g56.t1palmitoleoyl-protein carboxylesterase notum1a-likeJBrowse
76394at6073Complete437.2301.0amic_s0032.g108.t1pleckstrin homology domain-containing family A member 1-likeJBrowse
76410at6073Complete303.3178.0amic_s0083.g80.t2uncharacterized protein C5orf49-likeJBrowse
76411at6073Complete862.5562.0amic_s0152.g15.t1protein spire homolog 1JBrowse
76416at6073Complete546.2297.0amic_s0050.g90.t1UDP-N-acetylglucosamine transporterJBrowse
76430at6073Complete1021.1702.0amic_s0388.g5.t1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76433at6073Complete684.7434.0amic_s0184.g6.t1E3 ubiquitin-protein ligase MGRN1JBrowse
76438at6073Complete1349.0830.0amic_s0035.g57.t1Structural maintenance of chromosomes protein 6JBrowse
76442at6073Complete835.6477.0amic_s0154.g63.t1tetratricopeptide repeat protein 29-likeJBrowse
76443at6073Complete295.7200.0amic_s0112.g44.t1tumor protein p53-inducible nuclear protein 2JBrowse
76456at6073Complete1248.1760.0amic_s0119.g29.t1twinkle protein, mitochondrial-likeJBrowse
76457at6073Complete1233.2761.0amic_s0054.g76.t1protein CIP2A homologJBrowse
76460at6073Complete746.6394.0amic_s0090.g52.t2F-box/LRR-repeat protein 2-likeJBrowse
76463at6073Fragmented553.8336.0amic_s0040.g178.t1short transient receptor potential channel 4-likeJBrowse
76464at6073Complete478.0263.0amic_s0015.g93.t1syntaxin-18JBrowse
76465at6073Duplicated931.4581.0amic_s0050.g13.t2Cysteine-rich protein 2-binding proteinJBrowse
76465at6073Duplicated910.4581.0amic_s0050.g13.t1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Complete1404.1810.0amic_s0034.g84.t1histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Duplicated818.6509.0amic_s0153.g15.t1UBX domain-containing protein 7JBrowse
76477at6073Duplicated792.8509.0amic_s0153.g15.t2UBX domain-containing protein 7JBrowse
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