BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76595at6073Complete460.8321.0aint_s0047.g14.t1sorting nexin-20JBrowse
76603at6073Complete1004.7596.0aint_s0386.g20.t1poly(A)-specific ribonuclease PARNJBrowse
76611at6073Complete233.9155.0aint_s0005.g31.t1chromobox protein homolog 1JBrowse
76612at6073Complete512.6478.0aint_s0061.g32.t1apoptosis-stimulating of p53 protein 2JBrowse
76613at6073Duplicated230.6157.0aint_s0087.g60.t1NADH dehydrogenase JBrowse
76613at6073Duplicated230.3157.0aint_s0087.g59.t1NADH dehydrogenase JBrowse
76617at6073Complete608.6393.0aint_s0243.g7.t1all trans-polyprenyl-diphosphate synthase PDSS2-likeJBrowse
76618at6073Complete2262.31479.0aint_s0251.g13.t1mitogen-activated protein kinase kinase kinase 4-likeJBrowse
76619at6073Complete540.3378.0aint_s0121.g12.t1cerebellar degeneration-related protein 2-likeJBrowse
76625at6073Complete922.0566.0aint_s0365.g22.t12',5'-phosphodiesterase 12JBrowse
76626at6073Complete481.0342.0aint_s0249.g13.t1vacuolar protein sorting-associated protein 37AJBrowse
76629at6073Complete577.4290.0aint_s0055.g45.t1ubiquitin recognition factor in ER-associated degradation protein 1JBrowse
76633at6073Fragmented1170.1208.0aint_s0139.g27.t1putative ATP-dependent RNA helicase TDRD12JBrowse
76641at6073Complete957.9733.0aint_s0636.g3.t1UV radiation resistance-associated protein-likeJBrowse
76646at6073Complete454.2306.0aint_s0077.g23.t1WD repeat-containing protein 53JBrowse
76648at6073Complete366.9261.0aint_s0203.g14.t1consortin-likeJBrowse
76651at6073Complete766.9449.0aint_s0138.g25.t1la-related protein 6JBrowse
76659at6073Fragmented642.2402.0aint_s0013.g44.t1DNA mismatch repair Msh2-likeJBrowse
76664at6073Complete6155.64184.0aint_s0280.g33.t1fat-like cadherin-related tumor suppressor homologJBrowse
76665at6073Duplicated1377.4865.0aint_s0063.g23.t3coiled-coil and C2 domain-containing protein 1-likeJBrowse
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