BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76792at6073Complete516.1336.0alor_g20514.t1STAM-binding protein-likeJBrowse
76797at6073Complete900.4650.0alor_g24719.t1nuclear pore complex protein Nup88-likeJBrowse
76805at6073Complete510.6379.0alor_g1865.t1uncharacterized protein LOC130614738 isoform X1JBrowse
76820at6073Complete764.7395.0alor_g15626.t1pectin acetylesterase 5JBrowse
76835at6073Complete653.7465.0alor_g12988.t1RNA polymerase II-associated protein 3JBrowse
76840at6073Complete776.3433.0alor_g5107.t1SHC-transforming protein 1JBrowse
76843at6073Duplicated419.0274.0alor_g18592.t1leucine-rich repeat-containing protein 59JBrowse
76843at6073Duplicated419.0274.0alor_g18866.t1leucine-rich repeat-containing protein 59JBrowse
76846at6073Complete2237.41597.0alor_g14874.t1gamma-tubulin complex component 6JBrowse
76853at6073Complete1639.41145.0alor_g10391.t1RB1-inducible coiled-coil protein 1JBrowse
76855at6073Complete497.1319.0alor_g16180.t1Protein kinase C and casein kinase substrate in neuronsJBrowse
76861at6073Complete690.7425.0alor_g9521.t1probable protein phosphatase 2C 21JBrowse
76869at6073Duplicated610.1405.0alor_g22600.t1FGFR1 oncogene partnerJBrowse
76869at6073Duplicated602.7405.0alor_g22600.t3FGFR1 oncogene partnerJBrowse
76873at6073Complete1742.3981.0alor_g21859.t1Zinc finger MIZ domain-containing protein 1JBrowse
76877at6073Complete681.6468.0alor_g24197.t1ankyrin repeat and LEM domain-containing protein 1JBrowse
76878at6073Complete666.8367.0alor_g24610.t1signal peptide peptidase-like 3JBrowse
76879at6073Complete1120.6782.0alor_g2015.t1leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76889at6073Complete1381.41004.0alor_g20125.t1testis-expressed protein 2JBrowse
76894at6073Complete726.3622.0alor_g10691.t1serine/threonine-protein kinase unc-51JBrowse
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