BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76480at6073Complete472.1299.0amic_s0157.g27.t1DDB1- and CUL4-associated factor 10JBrowse
76484at6073Complete1854.71145.0amic_s0012.g122.t1serine/threonine-protein kinase SIK3-likeJBrowse
76490at6073Complete552.3371.0amic_s0008.g30.t1protein Njmu-R1-likeJBrowse
76492at6073Complete723.7442.0amic_s0054.g7.t1UBX domain-containing protein 6-likeJBrowse
76494at6073Complete607.4381.0amic_s0010.g79.t1F-box only protein 4-likeJBrowse
76499at6073Complete348.0222.0amic_s0217.g22.t1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
76502at6073Complete1019.8619.0amic_s0032.g63.t1uncharacterized protein LOC116292841JBrowse
76504at6073Complete1342.3856.0amic_s0156.g40.t1protein inturned-likeJBrowse
76516at6073Fragmented589.9422.0amic_s0002.g169.t1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76519at6073Complete1009.2626.0amic_s0015.g101.t1E3 ubiquitin-protein ligase RNF103JBrowse
76525at6073Duplicated657.2430.0amic_s0201.g30.t2glucocorticoid-induced transcript 1 protein-likeJBrowse
76525at6073Duplicated653.8430.0amic_s0201.g30.t1glucocorticoid-induced transcript 1 protein-likeJBrowse
76527at6073Fragmented1660.298.0amic_s0131.g6.t2neurogenic locus notch homolog protein 1-likeJBrowse
76533at6073Complete550.8383.0amic_s0075.g20.t1Charged multivesicular body protein 7JBrowse
76536at6073Complete1092.2787.0amic_s0002.g276.t1transcription initiation factor TFIID subunit 4JBrowse
76543at6073Complete543.9329.0amic_s0014.g77.t1forkhead box protein N4-likeJBrowse
76545at6073Complete245.1138.0amic_s0162.g14.t1plasminogen receptor (KT)JBrowse
76547at6073Complete762.7498.0amic_s0018.g135.t1tubulin-specific chaperone E-likeJBrowse
76551at6073Complete566.6364.0amic_s0238.g3.t1N(6)-adenine-specific methyltransferase METTL4-likeJBrowse
76560at6073Fragmented343.8226.0amic_s0101.g47.t1methionyl-tRNA formyltransferase, mitochondrialJBrowse
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