BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76701at6073Duplicated829.9573.0FUN_029473-T1Calcium homeostasis endoplasmic reticulumJBrowse
76701at6073Duplicated722.3500.0FUN_029473-T2Calcium homeostasis endoplasmic reticulumJBrowse
76707at6073Complete485.9308.0FUN_001484-T1coiled-coil domain-containing protein 149JBrowse
76714at6073Complete1008.9682.0FUN_014487-T1LON peptidase N-terminal domain and RING finger 3JBrowse
76720at6073Fragmented375.0315.0FUN_040215-T1rDNA transcriptional regulator pol5-likeJBrowse
76721at6073Complete750.6547.0FUN_043558-T1uncharacterized protein LOC116294853JBrowse
76734at6073Complete612.4395.0FUN_024454-T1RING finger protein 150JBrowse
76737at6073Fragmented322.5218.0FUN_006421-T2histone PARylation factor 1JBrowse
76744at6073Complete995.3482.0FUN_001842-T1mothers against decapentaplegic homolog 4JBrowse
76758at6073Complete306.9204.0FUN_022431-T1uncharacterized protein C1orf146-likeJBrowse
76762at6073Complete376.7236.0FUN_037991-T1SUN domain-containing protein 3 isoform X1JBrowse
76773at6073Complete233.5138.0FUN_032392-T1transmembrane protein 18JBrowse
76775at6073Complete495.9330.0FUN_025426-T1Xyloside xylosyltransferase 1JBrowse
76776at6073Complete405.3272.0FUN_004872-T1transcription termination factor 3, mitochondrial-likeJBrowse
76787at6073Complete817.2491.0FUN_043532-T1Far upstream element-binding protein 3JBrowse
76788at6073Complete539.0325.0FUN_006996-T1hsc70-interacting proteinJBrowse
76791at6073Complete670.1442.0FUN_015222-T1sedoheptulokinase-likeJBrowse
76792at6073Complete495.4322.0FUN_036827-T2STAM-binding protein-likeJBrowse
76797at6073Complete897.6650.0FUN_014612-T1nuclear pore complex protein Nup88-likeJBrowse
76805at6073Complete512.5379.0FUN_034945-T1uncharacterized protein LOC130614738 isoform X1JBrowse
Go to page: of 168 pages
TOP