BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76896at6073Complete495.2398.0alor_g2697.t1protein tweety homolog 2-likeJBrowse
76901at6073Complete786.1565.0alor_g445.t1uncharacterized protein KIAA2013 homologJBrowse
76905at6073Duplicated464.7312.0alor_g18563.t1zinc finger protein GLI2-likeJBrowse
76905at6073Duplicated464.7312.0alor_g18896.t1zinc finger protein GLI2-likeJBrowse
76914at6073Fragmented349.9249.0alor_g22649.t1E3 ubiquitin-protein ligase TRAIPJBrowse
76915at6073Complete1187.8797.0alor_g10482.t1WD repeat-containing protein 47JBrowse
76922at6073Complete567.7337.0alor_g2863.t1UBX domain-containing protein 1JBrowse
76925at6073Complete2349.31494.0alor_g5337.t1uncharacterized protein LOC116302959JBrowse
76929at6073Complete215.3165.0alor_g13081.t1non-histone chromosomal protein 6JBrowse
76930at6073Complete977.4722.0alor_g1823.t1DNA replication factor Cdt1JBrowse
76938at6073Complete749.8456.0alor_g13030.t1ELMO domain-containing protein 3JBrowse
76943at6073Duplicated281.7161.0alor_g6676.t1Zinc finger MYND domain-containing protein 11JBrowse
76943at6073Duplicated274.4158.0alor_g6676.t2Zinc finger MYND domain-containing protein 11JBrowse
76945at6073Duplicated399.7254.0alor_g22408.t2Kv channel-interacting 1JBrowse
76945at6073Duplicated378.5218.0alor_g22408.t1Kv channel-interacting 1JBrowse
76948at6073Complete534.3360.0alor_g24410.t1coiled-coil domain-containing protein 92JBrowse
76966at6073Complete401.9285.0alor_g26763.t1E2F-associated phosphoprotein-likeJBrowse
76990at6073Complete724.8564.0alor_g23988.t1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Complete672.6417.0alor_g21115.t1glycerate kinase-likeJBrowse
76993at6073Fragmented459.4345.0alor_g8317.t1afadin- and alpha-actinin-binding protein B-likeJBrowse
Go to page: of 167 pages
TOP