BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76564at6073Fragmented258.6176.0amic_s0018.g90.t1Complement component 1 Q subcomponent-binding, mitochondrialJBrowse
76577at6073Complete257.4163.0amic_s0102.g127.t139S ribosomal protein L21, mitochondrial-likeJBrowse
76581at6073Complete343.2215.0amic_s0025.g150.t1RWD domain-containing protein 1JBrowse
76593at6073Duplicated1186.5795.0amic_s0116.g73.t1IQ motif and SEC7 domain-containing protein 1 isoform X1JBrowse
76593at6073Duplicated1185.6792.0amic_s0116.g73.t2IQ motif and SEC7 domain-containing protein 1 isoform X1JBrowse
76595at6073Complete459.9321.0amic_s0112.g24.t1sorting nexin-20JBrowse
76603at6073Complete1001.9596.0amic_s0132.g17.t1poly(A)-specific ribonuclease PARNJBrowse
76611at6073Complete233.7155.0amic_s0089.g61.t1chromobox protein homolog 1JBrowse
76612at6073Complete517.0478.0amic_s0011.g142.t1apoptosis-stimulating of p53 protein 2JBrowse
76617at6073Complete607.1394.0amic_s0013.g7.t1all trans-polyprenyl-diphosphate synthase PDSS2-likeJBrowse
76618at6073Complete2260.01480.0amic_s0035.g75.t1mitogen-activated protein kinase kinase kinase 4-likeJBrowse
76619at6073Complete538.0378.0amic_s0125.g13.t1cerebellar degeneration-related protein 2-likeJBrowse
76625at6073Complete914.7566.0amic_s0011.g10.t12',5'-phosphodiesterase 12JBrowse
76626at6073Complete483.5343.0amic_s0165.g17.t1vacuolar protein sorting-associated protein 37AJBrowse
76629at6073Complete577.2290.0amic_s0018.g189.t1ubiquitin recognition factor in ER-associated degradation protein 1JBrowse
76633at6073Duplicated2170.71370.0amic_s0002.g319.t3putative ATP-dependent RNA helicase TDRD12JBrowse
76633at6073Duplicated2038.41370.0amic_s0002.g319.t1putative ATP-dependent RNA helicase TDRD12JBrowse
76633at6073Duplicated2036.91370.0amic_s0002.g319.t2putative ATP-dependent RNA helicase TDRD12JBrowse
76648at6073Complete495.9273.0amic_s0007.g64.t1consortin-likeJBrowse
76650at6073Complete779.2535.0amic_s0025.g68.t1biotin--protein ligaseJBrowse
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