BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6833at6073Complete286.8181.0aech_s0202.g13.t1AP-5 complex subunit sigma-1JBrowse
6836at6073Complete892.2506.0aech_s0182.g14.t1ATP-dependent RNA helicase DDX41JBrowse
6883at6073Complete655.7432.0aech_s0006.g204.t1Neurotransmitter-gated ion-channel ligand-binding domainJBrowse
6910at6073Fragmented360.1196.0aech_s0128.g55.t1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Fragmented476.0257.0aech_s0007.g205.t1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6963at6073Complete339.0251.0aech_s0144.g23.t1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6970at6073Complete928.7463.0aech_s0011.g343.t1ribosomal protein S6 kinase beta-1JBrowse
6971at6073Duplicated727.5629.0aech_s0176.g25.t3uncharacterized protein LOC116290996JBrowse
6971at6073Duplicated719.7629.0aech_s0176.g25.t1uncharacterized protein LOC116290996JBrowse
6971at6073Duplicated718.4629.0aech_s0176.g25.t2uncharacterized protein LOC116290996JBrowse
6982at6073Duplicated442.1262.0aech_s0002.g214.t1alkaline ceramidase 3JBrowse
6982at6073Duplicated428.3257.0aech_s0002.g214.t2alkaline ceramidase 3JBrowse
6986at6073Complete1117.3539.0aech_s0013.g123.t1EH domain-containing protein 3JBrowse
7017at6073Complete527.5404.0aech_s0018.g80.t1zinc finger protein 503JBrowse
7018at6073Complete472.2331.0aech_s0507.g1.t1synaptosomal-associated protein 47JBrowse
7023at6073Fragmented324.9251.0aech_s0001.g149.t1serine proteaseJBrowse
7030at6073Complete463.7260.0aech_s0001.g381.t150S ribosomal protein L4-likeJBrowse
7035at6073Complete1147.9687.0aech_s0019.g42.t1tRNA wybutosine-synthesizing protein 4JBrowse
7189at6073Complete846.5527.0aech_s0055.g34.t1double-stranded RNA-specific editase 1JBrowse
7225at6073Complete682.8397.0aech_s0015.g237.t1uncharacterized protein LOC116299609JBrowse
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