BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6963at6073Complete336.3251.0aint_s0165.g8.t1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6970at6073Duplicated928.2463.0aint_s0659.g7.t1ribosomal protein S6 kinase beta-1JBrowse
6970at6073Duplicated880.1412.0aint_s0659.g7.t2ribosomal protein S6 kinase beta-1JBrowse
6971at6073Complete671.3579.0aint_s0009.g26.t1uncharacterized protein LOC116290996JBrowse
6982at6073Duplicated435.1262.0aint_s0077.g71.t1alkaline ceramidase 3JBrowse
6982at6073Duplicated422.8257.0aint_s0077.g71.t2alkaline ceramidase 3JBrowse
6986at6073Complete1112.6539.0aint_s0386.g18.t1EH domain-containing protein 3JBrowse
7017at6073Complete525.4404.0aint_s0353.g6.t1zinc finger protein 503JBrowse
7018at6073Fragmented324.1247.0aint_s0036.g54.t1synaptosomal-associated protein 47JBrowse
7023at6073Complete507.7371.0aint_s0297.g30.t1serine proteaseJBrowse
7030at6073Complete459.9260.0aint_s0003.g24.t150S ribosomal protein L4-likeJBrowse
7035at6073Complete1146.3687.0aint_s0039.g53.t1tRNA wybutosine-synthesizing protein 4JBrowse
7189at6073Complete845.0527.0aint_s0096.g30.t1double-stranded RNA-specific editase 1JBrowse
7225at6073Complete682.2397.0aint_s0322.g19.t1uncharacterized protein LOC116299609JBrowse
7235at6073Complete1582.6881.0aint_s0037.g50.t1phospholipase D1-likeJBrowse
7248at6073Complete2038.21061.0aint_s0027.g11.t1WD repeat-containing protein 49JBrowse
7269at6073Complete1281.7744.0aint_s0335.g22.t1chondroitin sulfate synthase 2JBrowse
7275at6073Complete583.1320.0aint_s0016.g87.t1zinc transporter ZIP11-likeJBrowse
7304at6073Complete450.7304.0aint_s0054.g80.t1Aspartate beta-hydroxylase domain-containing 2JBrowse
7306at6073Complete848.6433.0aint_s0055.g93.t1EH domain-containing protein 1-likeJBrowse
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