BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6727at6073Duplicated381.4205.0amic_s0009.g29.t1Radial spoke head 1JBrowse
6767at6073Complete175.699.0amic_s0099.g116.t110 kda heat shock proteinJBrowse
6836at6073Complete891.3506.0amic_s0154.g41.t1ATP-dependent RNA helicase DDX41JBrowse
6883at6073Complete656.0432.0amic_s0094.g68.t1Neurotransmitter-gated ion-channel ligand-binding domainJBrowse
6910at6073Fragmented360.1196.0amic_s0146.g32.t1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Complete675.4380.0amic_s0803.g1.t2tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6963at6073Complete338.2251.0amic_s0016.g75.t1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6970at6073Duplicated928.3463.0amic_s0019.g6.t2ribosomal protein S6 kinase beta-1JBrowse
6970at6073Duplicated881.2412.0amic_s0019.g6.t1ribosomal protein S6 kinase beta-1JBrowse
6971at6073Fragmented547.9506.0amic_s0169.g73.t1uncharacterized protein LOC116290996JBrowse
6982at6073Duplicated442.1262.0amic_s0023.g154.t1alkaline ceramidase 3JBrowse
6982at6073Duplicated428.4257.0amic_s0023.g154.t2alkaline ceramidase 3JBrowse
6986at6073Complete1112.9539.0amic_s0132.g15.t1EH domain-containing protein 3JBrowse
7017at6073Complete527.4404.0amic_s0166.g11.t1zinc finger protein 503JBrowse
7018at6073Complete570.3391.0amic_s0133.g38.t1synaptosomal-associated protein 47JBrowse
7023at6073Complete510.8371.0amic_s0103.g80.t1serine proteaseJBrowse
7030at6073Complete463.0260.0amic_s0070.g63.t150S ribosomal protein L4-likeJBrowse
7035at6073Duplicated1161.7687.0amic_s0145.g5.t2tRNA wybutosine-synthesizing protein 4JBrowse
7035at6073Duplicated1140.4687.0amic_s0145.g5.t1tRNA wybutosine-synthesizing protein 4JBrowse
7131at6073Complete293.1178.0amic_s0050.g82.t1ADP-ribosylation factor 16JBrowse
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