BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4265at6073Duplicated676.4413.0XP_074606384.1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4265at6073Duplicated671.1413.0XP_074606380.1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4265at6073Duplicated671.1413.0XP_074606381.1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4265at6073Duplicated671.1413.0XP_074606382.1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4265at6073Duplicated662.7413.0XP_074606385.1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4273at6073Duplicated837.1716.0XP_074608806.1uncharacterized protein LOC124453041 isoform X1JBrowse
4273at6073Duplicated793.1716.0XP_074608807.1uncharacterized protein LOC124453041 isoform X1JBrowse
4317at6073Complete2640.31244.0XP_074630598.1methionine synthaseJBrowse
4319at6073Complete758.2446.0XP_074638343.1meiosis-specific with OB domain-containing proteinJBrowse
4355at6073Complete869.1429.0XP_074615818.1actin-like protein 6BJBrowse
4370at6073Duplicated396.0217.0XP_074631455.1exosome complex component RRP46-likeJBrowse
4370at6073Duplicated377.0217.0XP_074631454.1exosome complex component RRP46-likeJBrowse
4400at6073Complete824.5403.0XP_074615679.1COP9 signalosome complex subunit 4JBrowse
4403at6073Complete1268.2588.0XP_074621264.1electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrialJBrowse
4413at6073Complete537.5326.0XP_074613962.1ADP-ribose glycohydrolase ARH3-likeJBrowse
4441at6073Complete870.3421.0XP_074621797.1multifunctional protein ADE2-likeJBrowse
4489at6073Complete744.6376.0XP_074638407.1Cytohesin-1JBrowse
4507at6073Duplicated465.2266.0XP_074635186.1Armadillo repeat-containing protein 1JBrowse
4507at6073Duplicated465.2266.0XP_074635187.1Armadillo repeat-containing protein 1JBrowse
4640at6073Duplicated250.9145.0XP_074607450.1MORN repeat-containing protein 2JBrowse
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