BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5127at6073Duplicated435.6269.0ENSOFVP00000015932.1E3 ubiquitin-protein ligase CCNB1IP1-likeJBrowse
5132at6073Complete556.7354.0ENSOFVP00000037844.1pleckstrin-2-likeJBrowse
5141at6073Duplicated1233.0657.0ENSOFVP00000012622.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5141at6073Duplicated1112.4542.0ENSOFVP00000012610.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Complete1125.0501.0ENSOFVP00000021274.1WD40 repeat-containing SMU1JBrowse
5187at6073Complete809.9396.0ENSOFVP00000013619.1lymphocyte expansion molecule-likeJBrowse
5223at6073Complete675.1428.0ENSOFVP00000010594.1inactive peptidyl-prolyl cis-trans isomerase FKBP6-likeJBrowse
5224at6073Complete813.3431.0ENSOFVP00000009331.1calcium-independent phospholipase A2-gamma-likeJBrowse
5253at6073Duplicated1303.7881.0ENSOFVP00000026182.1GPI inositol-deacylase-likeJBrowse
5253at6073Duplicated1303.7881.0ENSOFVP00000026190.1GPI inositol-deacylase-likeJBrowse
5397at6073Complete276.4129.0ENSOFVP00000036308.140S ribosomal protein S15aJBrowse
5399at6073Complete214.4115.0ENSOFVP00000013872.1protein lin-52 homologJBrowse
5460at6073Complete449.2218.0ENSOFVP00000033146.1glutamine amidotransferase-like class 1 domain-containing 1JBrowse
5474at6073Complete331.7188.0ENSOFVP00000034851.1U8 snoRNA-decapping enzyme-likeJBrowse
5475at6073Complete322.9184.0ENSOFVP00000023920.1ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
5506at6073Complete252.6168.0ENSOFVP00000033225.128S ribosomal protein S24, mitochondrialJBrowse
5527at6073Complete282.4156.0ENSOFVP00000004643.1protein SYS1 homologJBrowse
5560at6073Duplicated628.4356.0ENSOFVP00000012688.1snRNA-activating protein complex subunit 3JBrowse
5560at6073Duplicated580.5356.0ENSOFVP00000012677.1snRNA-activating protein complex subunit 3JBrowse
5616at6073Complete363.0186.0ENSOFVP00000029700.1mitochondrial import inner membrane translocase subunit Tim23JBrowse
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