BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3768at6073Duplicated1129.2619.0g277.t1.1glycogen JBrowse
3797at6073Duplicated334.8288.0BRAKERHOCP00005013371.1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3797at6073Duplicated334.8288.0g20276.t1.1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3805at6073Duplicated403.1359.0BRAKERHOCP00005009996.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3805at6073Duplicated403.1359.0g14555.t1.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Duplicated530.0461.0BRAKERHOCP00005011049.1F-box/LRR-repeat protein 20JBrowse
3818at6073Duplicated530.0461.0g15008.t1.1F-box/LRR-repeat protein 20JBrowse
3848at6073Duplicated801.8489.0BRAKERHOCP00005019754.15-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3848at6073Duplicated801.8489.0g10601.t1.15-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3911at6073Duplicated641.1575.0BRAKERHOCP00005003265.1Gamma-tubulin complex component 4JBrowse
3911at6073Duplicated641.1575.0g5188.t1.1Gamma-tubulin complex component 4JBrowse
4064at6073Fragmented370.3261.0BRAKERHOCP00005012939.1T-box transcription factor TBX3-likeJBrowse
4079at6073Duplicated172.4211.0BRAKERHOCP00005009046.1sorting nexin-10B-likeJBrowse
4079at6073Duplicated172.4211.0g4040.t1.1sorting nexin-10B-likeJBrowse
4090at6073Duplicated179.1220.0BRAKERHOCP00005011749.1noggin-likeJBrowse
4090at6073Duplicated179.1220.0g15609.t1.1noggin-likeJBrowse
4117at6073Duplicated382.6211.0BRAKERHOCP00005000072.1ras-related protein Rab-5B-likeJBrowse
4117at6073Duplicated382.6211.0g6884.t1.1ras-related protein Rab-5B-likeJBrowse
4122at6073Duplicated329.4179.0BRAKERHOCP00005014255.1Trafficking protein particle complex subunit 3JBrowse
4122at6073Duplicated329.4179.0g16681.t1.1Trafficking protein particle complex subunit 3JBrowse
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