BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4679at6073Duplicated305.1140.0ENSORFP00005034682.1large ribosomal subunit protein uL14JBrowse
4679at6073Duplicated300.3137.0ENSORFP00005034669.1large ribosomal subunit protein uL14JBrowse
4693at6073Complete923.3505.0ENSORFP00005000243.1frizzled-5JBrowse
4720at6073Duplicated224.3135.0ENSORFP00005044953.1Zinc finger SWIM domain-containing protein 7JBrowse
4720at6073Duplicated224.2135.0ENSORFP00005044934.1Zinc finger SWIM domain-containing protein 7JBrowse
4720at6073Duplicated193.9135.0ENSORFP00005044939.1Zinc finger SWIM domain-containing protein 7JBrowse
4751at6073Duplicated769.51447.0ENSORFP00005014876.1laminin subunit gamma-1JBrowse
4751at6073Duplicated760.91410.0ENSORFP00005014860.1laminin subunit gamma-1JBrowse
4751at6073Duplicated658.61342.0ENSORFP00005028734.1laminin subunit gamma-1JBrowse
4751at6073Duplicated770.91327.0ENSORFP00005008383.1laminin subunit gamma-1JBrowse
4800at6073Duplicated426.3245.0ENSORFP00005024156.1testis-expressed protein 47JBrowse
4800at6073Duplicated363.8239.0ENSORFP00005024140.1testis-expressed protein 47JBrowse
4805at6073Complete170.983.0ENSORFP00005006034.140S ribosomal protein S21JBrowse
4808at6073Complete534.0348.0ENSORFP00005052932.1P2X receptorJBrowse
4816at6073Fragmented479.1255.0ENSORFP00005053799.1tetratricopeptide repeat protein 17JBrowse
4848at6073Complete576.0287.0ENSORFP00005041265.1F-actin-capping proteinJBrowse
4849at6073Duplicated362.1216.0ENSORFP00005015856.1synaptogyrin-2-likeJBrowse
4849at6073Duplicated362.1216.0ENSORFP00005050094.1synaptogyrin-2-likeJBrowse
4849at6073Duplicated331.9198.0ENSORFP00005042172.1synaptogyrin-2-likeJBrowse
4849at6073Duplicated331.8198.0ENSORFP00005050088.1synaptogyrin-2-likeJBrowse
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