BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76778at6073Complete527.8360.0aint_s0113.g9.t1malate dehydrogenase 1BJBrowse
76787at6073Duplicated899.1562.0aint_s0022.g68.t1Far upstream element-binding protein 3JBrowse
76787at6073Duplicated880.9562.0aint_s0022.g68.t2Far upstream element-binding protein 3JBrowse
76788at6073Fragmented378.2224.0aint_s0417.g8.t1hsc70-interacting proteinJBrowse
76791at6073Complete671.4442.0aint_s0023.g43.t1sedoheptulokinase-likeJBrowse
76792at6073Complete609.5375.0aint_s0012.g92.t1STAM-binding protein-likeJBrowse
76797at6073Fragmented696.2514.0aint_s0010.g24.t1nuclear pore complex protein Nup88-likeJBrowse
76805at6073Duplicated506.9379.0aint_s0047.g7.t1uncharacterized protein LOC130614738 isoform X1JBrowse
76805at6073Duplicated505.2379.0aint_s0047.g7.t2uncharacterized protein LOC130614738 isoform X1JBrowse
76820at6073Complete839.1457.0aint_s0091.g8.t1pectin acetylesterase 5JBrowse
76835at6073Complete668.6465.0aint_s0042.g38.t1RNA polymerase II-associated protein 3JBrowse
76836at6073Duplicated819.8682.0aint_s2722.g2.t1general transcription factor 3C polypeptide 4JBrowse
76836at6073Duplicated818.1682.0aint_s0683.g5.t1general transcription factor 3C polypeptide 4JBrowse
76840at6073Complete653.8440.0aint_s0059.g25.t1SHC-transforming protein 1JBrowse
76843at6073Fragmented357.8216.0aint_s3474.g1.t1leucine-rich repeat-containing protein 59JBrowse
76846at6073Complete2110.11494.0aint_s0202.g22.t1gamma-tubulin complex component 6JBrowse
76853at6073Fragmented1332.3730.0aint_s0572.g7.t1RB1-inducible coiled-coil protein 1JBrowse
76855at6073Complete493.5319.0aint_s0144.g36.t1Protein kinase C and casein kinase substrate in neuronsJBrowse
76861at6073Complete688.8425.0aint_s0227.g17.t1probable protein phosphatase 2C 21JBrowse
76864at6073Fragmented160.8133.0aint_s0446.g3.t1meiotic recombination protein REC114JBrowse
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