BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77002at6073Complete897.5523.0alor_g21788.t1Deformed epidermal autoregulatory factor 1JBrowse
77005at6073Complete520.5345.0alor_g16831.t1thioredoxin domain-containing protein 5JBrowse
77006at6073Complete520.2286.0alor_g17744.t1UbiA prenyltransferase domain-containing protein 1JBrowse
77014at6073Complete429.9279.0alor_g26518.t1leucine-rich repeat-containing protein 40-likeJBrowse
77026at6073Complete1299.8806.0alor_g6376.t1radial spoke head 10 homolog B-likeJBrowse
77034at6073Fragmented969.9999.0alor_g2677.t1putative leucine-rich repeat-containing protein DDB_G0290503JBrowse
77036at6073Complete465.4292.0alor_g11049.t1Vacuolar protein sorting-associated protein 72JBrowse
77038at6073Complete1818.11224.0alor_g9111.t1enhancer of mRNA-decapping protein 4JBrowse
77045at6073Complete387.8273.0alor_g24677.t1E3 ubiquitin-protein ligase rnf146JBrowse
77049at6073Complete759.2500.0alor_g25263.t1stromal interaction molecule 1-likeJBrowse
77068at6073Complete1930.81218.0alor_g25829.t1kinesin-like protein 1 isoform X1JBrowse
77076at6073Complete1423.3928.0alor_g7548.t1leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77078at6073Complete758.1430.0alor_g9908.t1coiled-coil domain-containing protein 96JBrowse
77082at6073Fragmented350.5188.0alor_g17914.t1uncharacterized protein LOC116292340JBrowse
77087at6073Fragmented392.9265.0alor_g6325.t1DNA-directed RNA polymerase III subunit RPC4JBrowse
77088at6073Complete1214.4777.0alor_g24712.t12 -5 -oligoadenylate synthase 1JBrowse
77089at6073Complete1049.8868.0alor_g23469.t1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77092at6073Complete627.7424.0alor_g21392.t1nucleotide exchange factor SIL1JBrowse
77093at6073Complete284.1180.0alor_g13588.t1tetratricopeptide repeat protein 33JBrowse
77095at6073Complete701.7433.0alor_g229.t1DNA cross-link repair 1AJBrowse
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