BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76651at6073Complete755.7448.0amic_s0100.g20.t1la-related protein 6JBrowse
76659at6073Complete1020.8646.0amic_s0181.g31.t1DNA mismatch repair Msh2-likeJBrowse
76665at6073Duplicated1226.7823.0amic_s0057.g34.t1coiled-coil and C2 domain-containing protein 1-likeJBrowse
76665at6073Duplicated1213.6823.0amic_s0057.g34.t2coiled-coil and C2 domain-containing protein 1-likeJBrowse
76666at6073Complete2371.21676.0amic_s0036.g13.t1rho GTPase-activating protein 45-likeJBrowse
76690at6073Duplicated182.4109.0amic_s0107.g45.t1protein boule-likeJBrowse
76690at6073Duplicated182.2109.0amic_s0107.g45.t2protein boule-likeJBrowse
76693at6073Complete2595.11475.0amic_s0008.g86.t1voltage-dependent T-type calcium channel subunit alpha-1H-likeJBrowse
76694at6073Complete306.8214.0amic_s0030.g75.t1ankyrin repeat domain-containing 40JBrowse
76696at6073Complete1018.5646.0amic_s0065.g31.t1Glycosylphosphatidylinositol anchor attachment 1JBrowse
76701at6073Complete788.6544.0amic_s0287.g4.t1Calcium homeostasis endoplasmic reticulumJBrowse
76707at6073Complete484.8308.0amic_s0182.g46.t1coiled-coil domain-containing protein 149JBrowse
76714at6073Duplicated1010.6682.0amic_s0075.g58.t2LON peptidase N-terminal domain and RING finger 3JBrowse
76714at6073Duplicated1005.5682.0amic_s0075.g58.t1LON peptidase N-terminal domain and RING finger 3JBrowse
76720at6073Fragmented840.0608.0amic_s0135.g12.t1rDNA transcriptional regulator pol5-likeJBrowse
76721at6073Complete754.9546.0amic_s0033.g23.t1uncharacterized protein LOC116294853JBrowse
76737at6073Complete505.9326.0amic_s0098.g38.t1histone PARylation factor 1JBrowse
76744at6073Complete995.3482.0amic_s0006.g34.t1mothers against decapentaplegic homolog 4JBrowse
76758at6073Complete306.9204.0amic_s0079.g57.t1uncharacterized protein C1orf146-likeJBrowse
76775at6073Complete506.3330.0amic_s0416.g5.t1Xyloside xylosyltransferase 1JBrowse
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