BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76869at6073Duplicated608.2405.0aint_s0290.g7.t2FGFR1 oncogene partnerJBrowse
76869at6073Duplicated600.7405.0aint_s0290.g7.t1FGFR1 oncogene partnerJBrowse
76873at6073Duplicated1959.31115.0aint_s0205.g9.t3Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1906.51071.0aint_s0205.g9.t2Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1903.21071.0aint_s0205.g9.t1Zinc finger MIZ domain-containing protein 1JBrowse
76877at6073Complete708.2481.0aint_s0043.g36.t1ankyrin repeat and LEM domain-containing protein 1JBrowse
76878at6073Fragmented509.7266.0aint_s0055.g42.t1signal peptide peptidase-like 3JBrowse
76879at6073Complete1252.6853.0aint_s0015.g94.t2leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76889at6073Complete1275.1844.0aint_s0185.g35.t1testis-expressed protein 2JBrowse
76894at6073Duplicated857.7622.0aint_s0339.g5.t1serine/threonine-protein kinase unc-51JBrowse
76894at6073Duplicated857.7622.0aint_s0339.g5.t2serine/threonine-protein kinase unc-51JBrowse
76896at6073Complete548.6432.0aint_s0121.g28.t2protein tweety homolog 2-likeJBrowse
76901at6073Complete771.0552.0aint_s0069.g106.t1uncharacterized protein KIAA2013 homologJBrowse
76905at6073Complete464.3313.0aint_s0014.g27.t1zinc finger protein GLI2-likeJBrowse
76914at6073Fragmented253.3179.0aint_s0037.g5.t1E3 ubiquitin-protein ligase TRAIPJBrowse
76915at6073Complete1198.7834.0aint_s0011.g18.t1WD repeat-containing protein 47JBrowse
76922at6073Fragmented404.8244.0aint_s0181.g18.t1UBX domain-containing protein 1JBrowse
76925at6073Complete2343.71494.0aint_s0096.g46.t1uncharacterized protein LOC116302959JBrowse
76929at6073Complete217.3165.0aint_s0026.g82.t1non-histone chromosomal protein 6JBrowse
76930at6073Complete981.4722.0aint_s0047.g44.t1DNA replication factor Cdt1JBrowse
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