BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77101at6073Complete1025.2662.0alor_g19481.t1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77103at6073Complete991.2709.0alor_g25954.t1ribonucleases P/MRP protein subunit POP1-likeJBrowse
77114at6073Complete1169.1858.0alor_g6759.t1folliculin-interacting protein 1JBrowse
77115at6073Complete713.8412.0alor_g8059.t1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Duplicated168.6114.0alor_g20508.t2nucleolar and coiled-body phosphoprotein 1JBrowse
77134at6073Duplicated166.0114.0alor_g20508.t1nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete631.7413.0alor_g3000.t1peroxisomal membrane protein PEX13-likeJBrowse
77148at6073Complete816.2569.0alor_g24024.t1kinetochore protein NDC80 homologJBrowse
77163at6073Complete598.2426.0alor_g8387.t1coiled-coil domain-containing protein 138JBrowse
77166at6073Fragmented448.9257.0alor_g15201.t1forkhead box protein J3-likeJBrowse
77171at6073Complete401.2287.0alor_g9412.t1transcriptional regulator Myc-1-likeJBrowse
77172at6073Fragmented335.5225.0alor_g3384.t1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77177at6073Complete471.0307.0alor_g7387.t1HAUS augmin-like complex subunit 4JBrowse
77182at6073Complete352.4267.0alor_g8947.t1transcription initiation factor IIA subunit 1JBrowse
77184at6073Complete927.6567.0alor_g12841.t1transcriptional protein SWT1-likeJBrowse
77192at6073Complete290.6220.0alor_g2061.t1HAUS augmin-like complex subunit 1JBrowse
77195at6073Complete370.6317.0alor_g12791.t1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77199at6073Complete395.1240.0alor_g25151.t1reticulon-1-AJBrowse
77200at6073Complete657.0515.0alor_g1678.t1scaffold protein salvador-likeJBrowse
77208at6073Complete701.4443.0alor_g24722.t1ribonuclease IIIJBrowse
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