BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76776at6073Complete407.2272.0amic_s0048.g78.t1transcription termination factor 3, mitochondrial-likeJBrowse
76778at6073Complete524.7360.0amic_s0099.g127.t1malate dehydrogenase 1BJBrowse
76787at6073Fragmented549.9364.0amic_s0033.g43.t1Far upstream element-binding protein 3JBrowse
76788at6073Complete534.6325.0amic_s0265.g26.t1hsc70-interacting proteinJBrowse
76791at6073Complete568.7367.0amic_s0202.g31.t1sedoheptulokinase-likeJBrowse
76792at6073Fragmented408.4194.0amic_s0077.g25.t1STAM-binding protein-likeJBrowse
76797at6073Fragmented697.5514.0amic_s0018.g78.t1nuclear pore complex protein Nup88-likeJBrowse
76805at6073Duplicated512.0379.0amic_s0112.g31.t1uncharacterized protein LOC130614738 isoform X1JBrowse
76805at6073Duplicated510.3379.0amic_s0112.g31.t2uncharacterized protein LOC130614738 isoform X1JBrowse
76820at6073Complete836.8457.0amic_s0041.g51.t1pectin acetylesterase 5JBrowse
76835at6073Complete669.8465.0amic_s0040.g39.t1RNA polymerase II-associated protein 3JBrowse
76836at6073Duplicated826.1682.0amic_s0782.g1.t1general transcription factor 3C polypeptide 4JBrowse
76836at6073Duplicated825.8682.0amic_s0040.g162.t1general transcription factor 3C polypeptide 4JBrowse
76840at6073Complete656.2440.0amic_s0255.g7.t1SHC-transforming protein 1JBrowse
76853at6073Duplicated1343.1979.0amic_s0157.g13.t1RB1-inducible coiled-coil protein 1JBrowse
76853at6073Duplicated1329.2979.0amic_s0157.g13.t2RB1-inducible coiled-coil protein 1JBrowse
76855at6073Complete499.3319.0amic_s0284.g11.t1Protein kinase C and casein kinase substrate in neuronsJBrowse
76861at6073Complete696.8425.0amic_s0068.g18.t1probable protein phosphatase 2C 21JBrowse
76864at6073Fragmented159.6133.0amic_s0295.g35.t1meiotic recombination protein REC114JBrowse
76869at6073Duplicated610.1405.0amic_s0013.g69.t1FGFR1 oncogene partnerJBrowse
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