BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76935at6073Complete239.5171.0aint_s0241.g10.t1uncharacterized protein LOC110236280 isoform X1JBrowse
76938at6073Complete754.0456.0aint_s0002.g119.t1ELMO domain-containing protein 3JBrowse
76943at6073Complete280.8161.0aint_s0134.g51.t1Zinc finger MYND domain-containing protein 11JBrowse
76945at6073Duplicated393.7248.0aint_s0087.g32.t2Kv channel-interacting 1JBrowse
76945at6073Duplicated378.1218.0aint_s0087.g32.t1Kv channel-interacting 1JBrowse
76945at6073Duplicated363.0218.0aint_s0087.g32.t3Kv channel-interacting 1JBrowse
76948at6073Complete531.1360.0aint_s0054.g81.t1coiled-coil domain-containing protein 92JBrowse
76966at6073Duplicated415.6286.0aint_s0111.g39.t1E2F-associated phosphoprotein-likeJBrowse
76966at6073Duplicated405.9286.0aint_s0111.g39.t2E2F-associated phosphoprotein-likeJBrowse
76990at6073Complete587.8476.0aint_s0046.g9.t1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Complete704.2439.0aint_s0247.g10.t1glycerate kinase-likeJBrowse
76993at6073Complete706.6506.0aint_s0073.g16.t1afadin- and alpha-actinin-binding protein B-likeJBrowse
77006at6073Complete515.4284.0aint_s0447.g1.t1UbiA prenyltransferase domain-containing protein 1JBrowse
77014at6073Complete430.2279.0aint_s0138.g27.t1leucine-rich repeat-containing protein 40-likeJBrowse
77026at6073Complete1301.4806.0aint_s0068.g33.t1radial spoke head 10 homolog B-likeJBrowse
77034at6073Complete1924.31694.0aint_s0121.g7.t1putative leucine-rich repeat-containing protein DDB_G0290503JBrowse
77036at6073Complete467.0292.0aint_s0818.g3.t1Vacuolar protein sorting-associated protein 72JBrowse
77038at6073Complete1989.21300.0aint_s0020.g110.t1enhancer of mRNA-decapping protein 4JBrowse
77045at6073Complete386.7272.0aint_s0055.g116.t1E3 ubiquitin-protein ligase rnf146JBrowse
77049at6073Complete758.9500.0aint_s0058.g35.t1stromal interaction molecule 1-likeJBrowse
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